Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.83□□□□□ -1.48
AMBRA1Q9C0C7 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC5.83□□□□□ -1.48
AMBRA1Q9C0C7 AC093815.1-201ENST00000508637 280 ntBASIC5.83□□□□□ -1.48
AMBRA1Q9C0C7 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC5.83□□□□□ -1.48
AMBRA1Q9C0C7 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.83□□□□□ -1.48
AMBRA1Q9C0C7 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC5.83□□□□□ -1.48
AMBRA1Q9C0C7 AC116917.1-201ENST00000520558 305 ntBASIC5.83□□□□□ -1.48
AMBRA1Q9C0C7 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
AMBRA1Q9C0C7 OR9G2P-201ENST00000533326 880 ntBASIC5.83□□□□□ -1.48
AMBRA1Q9C0C7 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC5.83□□□□□ -1.48
AMBRA1Q9C0C7 MTCYBP27-201ENST00000555160 670 ntBASIC5.83□□□□□ -1.48
AMBRA1Q9C0C7 AC104229.1-201ENST00000561364 255 ntBASIC5.83□□□□□ -1.48
AMBRA1Q9C0C7 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC5.83□□□□□ -1.48
AMBRA1Q9C0C7 AC023824.3-201ENST00000569003 562 ntBASIC5.83□□□□□ -1.48
AMBRA1Q9C0C7 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.83□□□□□ -1.48
AMBRA1Q9C0C7 AC245036.5-201ENST00000596330 847 ntBASIC5.83□□□□□ -1.48
AMBRA1Q9C0C7 AC079315.1-201ENST00000602952 623 ntBASIC5.83□□□□□ -1.48
AMBRA1Q9C0C7 AC004805.3-201ENST00000603178 310 ntBASIC5.83□□□□□ -1.48
AMBRA1Q9C0C7 AC113368.1-201ENST00000603736 382 ntBASIC5.83□□□□□ -1.48
AMBRA1Q9C0C7 AC073046.2-201ENST00000604756 527 ntBASIC5.83□□□□□ -1.48
AMBRA1Q9C0C7 AC018690.1-201ENST00000608144 626 ntBASIC5.83□□□□□ -1.48
AMBRA1Q9C0C7 AL592494.3-201ENST00000609485 464 ntBASIC5.83□□□□□ -1.48
AMBRA1Q9C0C7 AC093673.2-201ENST00000609674 331 ntBASIC5.83□□□□□ -1.48
AMBRA1Q9C0C7 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.83□□□□□ -1.48
AMBRA1Q9C0C7 RMST_5.1-201ENST00000618704 126 ntBASIC5.83□□□□□ -1.48
AMBRA1Q9C0C7 AC011330.2-201ENST00000621680 635 ntBASIC5.83□□□□□ -1.48
AMBRA1Q9C0C7 AP002791.1-201ENST00000623291 381 ntBASIC5.83□□□□□ -1.48
AMBRA1Q9C0C7 AL683826.1-201ENST00000624104 627 ntBASIC5.83□□□□□ -1.48
AMBRA1Q9C0C7 AC068213.1-201ENST00000625124 226 ntBASIC5.83□□□□□ -1.48
AMBRA1Q9C0C7 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.83□□□□□ -1.48
AMBRA1Q9C0C7 LINC02495-203ENST00000636704 242 ntBASIC5.83□□□□□ -1.48
AMBRA1Q9C0C7 AP001153.1-201ENST00000641024 338 ntBASIC5.83□□□□□ -1.48
AMBRA1Q9C0C7 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
AMBRA1Q9C0C7 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
AMBRA1Q9C0C7 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.83□□□□□ -1.48
AMBRA1Q9C0C7 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
AMBRA1Q9C0C7 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.83□□□□□ -1.48
AMBRA1Q9C0C7 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
AMBRA1Q9C0C7 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
AMBRA1Q9C0C7 AC119674.1-202ENST00000641333 1860 ntBASIC5.83□□□□□ -1.48
AMBRA1Q9C0C7 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC5.83□□□□□ -1.48
AMBRA1Q9C0C7 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.83□□□□□ -1.48
AMBRA1Q9C0C7 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.83□□□□□ -1.48
AMBRA1Q9C0C7 AC009135.2-201ENST00000624136 1768 ntBASIC5.83□□□□□ -1.48
AMBRA1Q9C0C7 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC5.82□□□□□ -1.48
AMBRA1Q9C0C7 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
AMBRA1Q9C0C7 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
AMBRA1Q9C0C7 AC005702.3-201ENST00000585345 1447 ntBASIC5.82□□□□□ -1.48
AMBRA1Q9C0C7 AC025470.1-201ENST00000510053 2032 ntBASIC5.82□□□□□ -1.48
AMBRA1Q9C0C7 HDAC1P2-201ENST00000453661 1398 ntBASIC5.82□□□□□ -1.48
AMBRA1Q9C0C7 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC5.82□□□□□ -1.48
AMBRA1Q9C0C7 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
AMBRA1Q9C0C7 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
AMBRA1Q9C0C7 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
AMBRA1Q9C0C7 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
AMBRA1Q9C0C7 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
AMBRA1Q9C0C7 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC5.82□□□□□ -1.48
AMBRA1Q9C0C7 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
AMBRA1Q9C0C7 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
AMBRA1Q9C0C7 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.82□□□□□ -1.48
AMBRA1Q9C0C7 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.82□□□□□ -1.48
AMBRA1Q9C0C7 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.82□□□□□ -1.48
AMBRA1Q9C0C7 RNU11-201ENST00000387069 134 ntBASIC5.82□□□□□ -1.48
AMBRA1Q9C0C7 GAPDHP15-201ENST00000398586 975 ntBASIC5.82□□□□□ -1.48
AMBRA1Q9C0C7 AL096800.1-201ENST00000405326 893 ntBASIC5.82□□□□□ -1.48
AMBRA1Q9C0C7 Z68694.1-201ENST00000413929 841 ntBASIC5.82□□□□□ -1.48
AMBRA1Q9C0C7 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
AMBRA1Q9C0C7 AL365338.1-201ENST00000422282 858 ntBASIC5.82□□□□□ -1.48
AMBRA1Q9C0C7 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
AMBRA1Q9C0C7 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.82□□□□□ -1.48
AMBRA1Q9C0C7 AL139158.1-201ENST00000424719 340 ntBASIC5.82□□□□□ -1.48
AMBRA1Q9C0C7 AL354707.3-201ENST00000427308 331 ntBASIC5.82□□□□□ -1.48
AMBRA1Q9C0C7 AC083862.1-201ENST00000427378 1242 ntBASIC5.82□□□□□ -1.48
AMBRA1Q9C0C7 USP24P1-201ENST00000433802 779 ntBASIC5.82□□□□□ -1.48
AMBRA1Q9C0C7 USP9YP24-201ENST00000434374 697 ntBASIC5.82□□□□□ -1.48
AMBRA1Q9C0C7 USP9YP17-201ENST00000444617 696 ntBASIC5.82□□□□□ -1.48
AMBRA1Q9C0C7 AL358794.1-201ENST00000445689 381 ntBASIC5.82□□□□□ -1.48
AMBRA1Q9C0C7 Z73417.1-201ENST00000447373 778 ntBASIC5.82□□□□□ -1.48
AMBRA1Q9C0C7 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.82□□□□□ -1.48
AMBRA1Q9C0C7 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.82□□□□□ -1.48
AMBRA1Q9C0C7 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC5.82□□□□□ -1.48
AMBRA1Q9C0C7 SYT14P1-201ENST00000481459 721 ntBASIC5.82□□□□□ -1.48
AMBRA1Q9C0C7 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC5.82□□□□□ -1.48
AMBRA1Q9C0C7 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
AMBRA1Q9C0C7 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC5.82□□□□□ -1.48
AMBRA1Q9C0C7 MTND4LP2-201ENST00000502312 285 ntBASIC5.82□□□□□ -1.48
AMBRA1Q9C0C7 AC010374.1-201ENST00000503762 1237 ntBASIC5.82□□□□□ -1.48
AMBRA1Q9C0C7 AC093870.1-201ENST00000506837 213 ntBASIC5.82□□□□□ -1.48
AMBRA1Q9C0C7 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC5.82□□□□□ -1.48
AMBRA1Q9C0C7 UGT2A3P7-201ENST00000510485 734 ntBASIC5.82□□□□□ -1.48
AMBRA1Q9C0C7 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.82□□□□□ -1.48
AMBRA1Q9C0C7 RNA5SP400-201ENST00000517155 111 ntBASIC5.82□□□□□ -1.48
AMBRA1Q9C0C7 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.82□□□□□ -1.48
AMBRA1Q9C0C7 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.82□□□□□ -1.48
AMBRA1Q9C0C7 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.82□□□□□ -1.48
AMBRA1Q9C0C7 OR4U1P-201ENST00000554958 912 ntBASIC5.82□□□□□ -1.48
AMBRA1Q9C0C7 MT1CP-201ENST00000567054 174 ntBASIC5.82□□□□□ -1.48
AMBRA1Q9C0C7 RN7SL475P-201ENST00000583379 298 ntBASIC5.82□□□□□ -1.48
AMBRA1Q9C0C7 AC027229.1-201ENST00000583887 253 ntBASIC5.82□□□□□ -1.48
AMBRA1Q9C0C7 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms