Protein–RNA interactions for Protein: Q7RTU4

BHLHA9, Class A basic helix-loop-helix protein 9, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHA9Q7RTU4 AL596266.1-201ENST00000448132 400 ntBASIC5.88□□□□□ -1.47
BHLHA9Q7RTU4 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.88□□□□□ -1.47
BHLHA9Q7RTU4 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
BHLHA9Q7RTU4 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC5.88□□□□□ -1.47
BHLHA9Q7RTU4 RPS3AP6-201ENST00000484430 795 ntBASIC5.88□□□□□ -1.47
BHLHA9Q7RTU4 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
BHLHA9Q7RTU4 AC119751.5-201ENST00000514077 770 ntBASIC5.88□□□□□ -1.47
BHLHA9Q7RTU4 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.88□□□□□ -1.47
BHLHA9Q7RTU4 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC5.88□□□□□ -1.47
BHLHA9Q7RTU4 AC109635.3-201ENST00000529536 185 ntBASIC5.88□□□□□ -1.47
BHLHA9Q7RTU4 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.88□□□□□ -1.47
BHLHA9Q7RTU4 MTND3P12-201ENST00000559068 328 ntBASIC5.88□□□□□ -1.47
BHLHA9Q7RTU4 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.88□□□□□ -1.47
BHLHA9Q7RTU4 AC018558.5-201ENST00000565840 952 ntBASIC5.88□□□□□ -1.47
BHLHA9Q7RTU4 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC5.88□□□□□ -1.47
BHLHA9Q7RTU4 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC5.88□□□□□ -1.47
BHLHA9Q7RTU4 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.88□□□□□ -1.47
BHLHA9Q7RTU4 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.88□□□□□ -1.47
BHLHA9Q7RTU4 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.88□□□□□ -1.47
BHLHA9Q7RTU4 AC011445.2-201ENST00000599274 173 ntBASIC5.88□□□□□ -1.47
BHLHA9Q7RTU4 PPATP2-201ENST00000605635 508 ntBASIC5.88□□□□□ -1.47
BHLHA9Q7RTU4 AC080013.3-201ENST00000606839 578 ntBASIC5.88□□□□□ -1.47
BHLHA9Q7RTU4 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.88□□□□□ -1.47
BHLHA9Q7RTU4 AC007683.2-201ENST00000624681 714 ntBASIC5.88□□□□□ -1.47
BHLHA9Q7RTU4 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
BHLHA9Q7RTU4 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
BHLHA9Q7RTU4 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
BHLHA9Q7RTU4 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC5.88□□□□□ -1.47
BHLHA9Q7RTU4 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
BHLHA9Q7RTU4 AC095050.2-201ENST00000510748 1458 ntBASIC5.88□□□□□ -1.47
BHLHA9Q7RTU4 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.88□□□□□ -1.47
BHLHA9Q7RTU4 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
BHLHA9Q7RTU4 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
BHLHA9Q7RTU4 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
BHLHA9Q7RTU4 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.88□□□□□ -1.47
BHLHA9Q7RTU4 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
BHLHA9Q7RTU4 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.88□□□□□ -1.47
BHLHA9Q7RTU4 AL359955.1-201ENST00000455242 3275 ntBASIC5.87□□□□□ -1.47
BHLHA9Q7RTU4 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
BHLHA9Q7RTU4 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
BHLHA9Q7RTU4 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
BHLHA9Q7RTU4 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
BHLHA9Q7RTU4 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
BHLHA9Q7RTU4 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
BHLHA9Q7RTU4 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
BHLHA9Q7RTU4 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
BHLHA9Q7RTU4 OR6K3-202ENST00000368146 996 ntBASIC5.87□□□□□ -1.47
BHLHA9Q7RTU4 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.87□□□□□ -1.47
BHLHA9Q7RTU4 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
BHLHA9Q7RTU4 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
BHLHA9Q7RTU4 NPM1P10-201ENST00000398310 865 ntBASIC5.87□□□□□ -1.47
BHLHA9Q7RTU4 MTND4LP20-201ENST00000402379 270 ntBASIC5.87□□□□□ -1.47
BHLHA9Q7RTU4 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.87□□□□□ -1.47
BHLHA9Q7RTU4 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.87□□□□□ -1.47
BHLHA9Q7RTU4 RPL23AP18-201ENST00000416139 468 ntBASIC5.87□□□□□ -1.47
BHLHA9Q7RTU4 MTND2P18-201ENST00000419962 1030 ntBASIC5.87□□□□□ -1.47
BHLHA9Q7RTU4 USP9YP21-201ENST00000420603 432 ntBASIC5.87□□□□□ -1.47
BHLHA9Q7RTU4 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.87□□□□□ -1.47
BHLHA9Q7RTU4 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC5.87□□□□□ -1.47
BHLHA9Q7RTU4 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.87□□□□□ -1.47
BHLHA9Q7RTU4 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.87□□□□□ -1.47
BHLHA9Q7RTU4 RPL34P27-201ENST00000428810 349 ntBASIC5.87□□□□□ -1.47
BHLHA9Q7RTU4 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC5.87□□□□□ -1.47
BHLHA9Q7RTU4 AC010153.1-201ENST00000432862 727 ntBASIC5.87□□□□□ -1.47
BHLHA9Q7RTU4 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC5.87□□□□□ -1.47
BHLHA9Q7RTU4 OR6D1P-201ENST00000436165 939 ntBASIC5.87□□□□□ -1.47
BHLHA9Q7RTU4 LDHAP2-201ENST00000437325 985 ntBASIC5.87□□□□□ -1.47
BHLHA9Q7RTU4 AC099063.2-201ENST00000446360 662 ntBASIC5.87□□□□□ -1.47
BHLHA9Q7RTU4 PPIAP20-201ENST00000449839 135 ntBASIC5.87□□□□□ -1.47
BHLHA9Q7RTU4 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC5.87□□□□□ -1.47
BHLHA9Q7RTU4 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC5.87□□□□□ -1.47
BHLHA9Q7RTU4 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC5.87□□□□□ -1.47
BHLHA9Q7RTU4 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC5.87□□□□□ -1.47
BHLHA9Q7RTU4 AC093719.1-201ENST00000480427 441 ntBASIC5.87□□□□□ -1.47
BHLHA9Q7RTU4 RN7SL466P-201ENST00000497546 295 ntBASIC5.87□□□□□ -1.47
BHLHA9Q7RTU4 RPS17P5-201ENST00000498293 408 ntBASIC5.87□□□□□ -1.47
BHLHA9Q7RTU4 AC105313.1-201ENST00000509121 353 ntBASIC5.87□□□□□ -1.47
BHLHA9Q7RTU4 AC109481.1-201ENST00000509173 282 ntBASIC5.87□□□□□ -1.47
BHLHA9Q7RTU4 AC106872.4-201ENST00000510050 523 ntBASIC5.87□□□□□ -1.47
BHLHA9Q7RTU4 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC5.87□□□□□ -1.47
BHLHA9Q7RTU4 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.87□□□□□ -1.47
BHLHA9Q7RTU4 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC5.87□□□□□ -1.47
BHLHA9Q7RTU4 Y_RNA.717-201ENST00000517106 92 ntBASIC5.87□□□□□ -1.47
BHLHA9Q7RTU4 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC5.87□□□□□ -1.47
BHLHA9Q7RTU4 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.87□□□□□ -1.47
BHLHA9Q7RTU4 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.87□□□□□ -1.47
BHLHA9Q7RTU4 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
BHLHA9Q7RTU4 MRPS21P7-201ENST00000566937 238 ntBASIC5.87□□□□□ -1.47
BHLHA9Q7RTU4 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC5.87□□□□□ -1.47
BHLHA9Q7RTU4 PRELID3BP3-201ENST00000584963 545 ntBASIC5.87□□□□□ -1.47
BHLHA9Q7RTU4 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC5.87□□□□□ -1.47
BHLHA9Q7RTU4 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC5.87□□□□□ -1.47
BHLHA9Q7RTU4 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.87□□□□□ -1.47
BHLHA9Q7RTU4 AC069542.2-201ENST00000624816 216 ntBASIC5.87□□□□□ -1.47
BHLHA9Q7RTU4 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC5.87□□□□□ -1.47
BHLHA9Q7RTU4 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC5.87□□□□□ -1.47
BHLHA9Q7RTU4 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.87□□□□□ -1.47
BHLHA9Q7RTU4 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC5.87□□□□□ -1.47
BHLHA9Q7RTU4 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
BHLHA9Q7RTU4 AL158152.1-201ENST00000602652 1435 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms