Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CBX1P83916 MIPEPP2-201ENST00000422560 1819 ntBASIC5.68□□□□□ -1.5
CBX1P83916 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
CBX1P83916 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CBX1P83916 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CBX1P83916 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CBX1P83916 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CBX1P83916 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.68□□□□□ -1.5
CBX1P83916 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.68□□□□□ -1.5
CBX1P83916 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CBX1P83916 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.68□□□□□ -1.5
CBX1P83916 AC116158.1-201ENST00000560231 2129 ntBASIC5.68□□□□□ -1.5
CBX1P83916 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.68□□□□□ -1.5
CBX1P83916 NDFIP2-203ENST00000487865 1384 ntTSL 2 BASIC5.67□□□□□ -1.5
CBX1P83916 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.67□□□□□ -1.5
CBX1P83916 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CBX1P83916 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CBX1P83916 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CBX1P83916 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CBX1P83916 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CBX1P83916 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CBX1P83916 RNU1-84P-201ENST00000365447 164 ntBASIC5.67□□□□□ -1.5
CBX1P83916 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CBX1P83916 MIR130A-201ENST00000385274 89 ntBASIC5.67□□□□□ -1.5
CBX1P83916 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
CBX1P83916 AL033519.1-201ENST00000407266 307 ntBASIC5.67□□□□□ -1.5
CBX1P83916 SNRPEP6-201ENST00000407465 277 ntBASIC5.67□□□□□ -1.5
CBX1P83916 AL139100.1-201ENST00000408001 498 ntBASIC5.67□□□□□ -1.5
CBX1P83916 AC002524.1-201ENST00000411687 547 ntBASIC5.67□□□□□ -1.5
CBX1P83916 CBX1P3-201ENST00000413296 527 ntBASIC5.67□□□□□ -1.5
CBX1P83916 RPSAP35-201ENST00000413753 818 ntBASIC5.67□□□□□ -1.5
CBX1P83916 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CBX1P83916 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC5.67□□□□□ -1.5
CBX1P83916 YWHAZP5-201ENST00000419975 730 ntBASIC5.67□□□□□ -1.5
CBX1P83916 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CBX1P83916 AC113412.1-201ENST00000425840 504 ntBASIC5.67□□□□□ -1.5
CBX1P83916 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.67□□□□□ -1.5
CBX1P83916 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CBX1P83916 AC073587.1-201ENST00000447093 876 ntBASIC5.67□□□□□ -1.5
CBX1P83916 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.67□□□□□ -1.5
CBX1P83916 TREML3P-201ENST00000457327 501 ntBASIC5.67□□□□□ -1.5
CBX1P83916 RPS12P31-201ENST00000491419 398 ntBASIC5.67□□□□□ -1.5
CBX1P83916 OR2A3P-201ENST00000493774 953 ntBASIC5.67□□□□□ -1.5
CBX1P83916 RPL15P21-201ENST00000495592 567 ntBASIC5.67□□□□□ -1.5
CBX1P83916 AC105391.1-201ENST00000503155 1045 ntBASIC5.67□□□□□ -1.5
CBX1P83916 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.67□□□□□ -1.5
CBX1P83916 AC134698.1-201ENST00000511619 643 ntBASIC5.67□□□□□ -1.5
CBX1P83916 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC5.67□□□□□ -1.5
CBX1P83916 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.67□□□□□ -1.5
CBX1P83916 SCARNA20.4-201ENST00000516969 131 ntBASIC5.67□□□□□ -1.5
CBX1P83916 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC5.67□□□□□ -1.5
CBX1P83916 AP002373.2-201ENST00000541631 1060 ntBASIC5.67□□□□□ -1.5
CBX1P83916 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.67□□□□□ -1.5
CBX1P83916 AC091304.5-201ENST00000568969 158 ntBASIC5.67□□□□□ -1.5
CBX1P83916 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.67□□□□□ -1.5
CBX1P83916 RN7SL426P-201ENST00000579106 295 ntBASIC5.67□□□□□ -1.5
CBX1P83916 RPL29P33-201ENST00000587474 316 ntBASIC5.67□□□□□ -1.5
CBX1P83916 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.67□□□□□ -1.5
CBX1P83916 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC5.67□□□□□ -1.5
CBX1P83916 RPS4XP21-201ENST00000603814 750 ntBASIC5.67□□□□□ -1.5
CBX1P83916 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CBX1P83916 AC079298.2-201ENST00000623885 459 ntBASIC5.67□□□□□ -1.5
CBX1P83916 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.67□□□□□ -1.5
CBX1P83916 AL672167.1-203ENST00000641299 2975 ntBASIC5.67□□□□□ -1.5
CBX1P83916 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CBX1P83916 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.67□□□□□ -1.5
CBX1P83916 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CBX1P83916 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
CBX1P83916 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
CBX1P83916 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CBX1P83916 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CBX1P83916 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CBX1P83916 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
CBX1P83916 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
CBX1P83916 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CBX1P83916 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.66□□□□□ -1.5
CBX1P83916 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.66□□□□□ -1.5
CBX1P83916 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CBX1P83916 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
CBX1P83916 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CBX1P83916 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CBX1P83916 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC5.66□□□□□ -1.5
CBX1P83916 VN1R53P-201ENST00000429536 957 ntBASIC5.66□□□□□ -1.5
CBX1P83916 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.66□□□□□ -1.5
CBX1P83916 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC5.66□□□□□ -1.5
CBX1P83916 RPS7P4-201ENST00000444127 582 ntBASIC5.66□□□□□ -1.5
CBX1P83916 AL158214.1-201ENST00000444423 404 ntBASIC5.66□□□□□ -1.5
CBX1P83916 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.66□□□□□ -1.5
CBX1P83916 HIGD1AP16-201ENST00000450986 258 ntBASIC5.66□□□□□ -1.5
CBX1P83916 LINC01364-201ENST00000452509 889 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CBX1P83916 PPIAP7-201ENST00000454070 489 ntBASIC5.66□□□□□ -1.5
CBX1P83916 AKR1D1P1-201ENST00000457236 936 ntBASIC5.66□□□□□ -1.5
CBX1P83916 AC020779.1-201ENST00000478757 796 ntBASIC5.66□□□□□ -1.5
CBX1P83916 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.66□□□□□ -1.5
CBX1P83916 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.66□□□□□ -1.5
CBX1P83916 AC008629.2-201ENST00000503783 483 ntBASIC5.66□□□□□ -1.5
CBX1P83916 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC5.66□□□□□ -1.5
CBX1P83916 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.66□□□□□ -1.5
CBX1P83916 AC023161.1-201ENST00000549532 420 ntTSL 3 BASIC5.66□□□□□ -1.5
CBX1P83916 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms