Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
MRE11P49959 MRRF-207ENST00000373729 870 ntTSL 3 BASIC7.09□□□□□ -1.27
MRE11P49959 RPL5P20-201ENST00000403848 896 ntBASIC7.09□□□□□ -1.27
MRE11P49959 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC7.09□□□□□ -1.27
MRE11P49959 METTL15P3-201ENST00000415522 1221 ntBASIC7.09□□□□□ -1.27
MRE11P49959 AC017078.1-201ENST00000416146 368 ntBASIC7.09□□□□□ -1.27
MRE11P49959 VN1R20P-201ENST00000425215 966 ntBASIC7.09□□□□□ -1.27
MRE11P49959 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC7.09□□□□□ -1.27
MRE11P49959 SETP8-201ENST00000435341 628 ntBASIC7.09□□□□□ -1.27
MRE11P49959 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC7.09□□□□□ -1.27
MRE11P49959 AC099063.2-201ENST00000446360 662 ntBASIC7.09□□□□□ -1.27
MRE11P49959 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC7.09□□□□□ -1.27
MRE11P49959 RPL31P15-201ENST00000449770 338 ntBASIC7.09□□□□□ -1.27
MRE11P49959 RPS26P39-201ENST00000469206 341 ntBASIC7.09□□□□□ -1.27
MRE11P49959 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
MRE11P49959 RPL5P14-201ENST00000494197 878 ntBASIC7.09□□□□□ -1.27
MRE11P49959 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC7.09□□□□□ -1.27
MRE11P49959 RPEP1-201ENST00000504507 658 ntBASIC7.09□□□□□ -1.27
MRE11P49959 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC7.09□□□□□ -1.27
MRE11P49959 AC111000.6-201ENST00000514471 709 ntBASIC7.09□□□□□ -1.27
MRE11P49959 AC021733.2-201ENST00000518830 497 ntBASIC7.09□□□□□ -1.27
MRE11P49959 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC7.09□□□□□ -1.27
MRE11P49959 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC7.09□□□□□ -1.27
MRE11P49959 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC7.09□□□□□ -1.27
MRE11P49959 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC7.09□□□□□ -1.27
MRE11P49959 AC125494.2-201ENST00000602431 657 ntBASIC7.09□□□□□ -1.27
MRE11P49959 AL445435.1-201ENST00000604232 665 ntBASIC7.09□□□□□ -1.27
MRE11P49959 AC124916.2-201ENST00000604416 224 ntBASIC7.09□□□□□ -1.27
MRE11P49959 AC087683.2-201ENST00000611384 326 ntBASIC7.09□□□□□ -1.27
MRE11P49959 AL163051.2-201ENST00000618976 735 ntBASIC7.09□□□□□ -1.27
MRE11P49959 AC096708.4-201ENST00000620563 552 ntBASIC7.09□□□□□ -1.27
MRE11P49959 AC004808.1-201ENST00000627671 721 ntBASIC7.09□□□□□ -1.27
MRE11P49959 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC7.09□□□□□ -1.27
MRE11P49959 AC099654.8-201ENST00000637757 681 ntBASIC7.09□□□□□ -1.27
MRE11P49959 AL078595.2-201ENST00000605309 1780 ntBASIC7.09□□□□□ -1.27
MRE11P49959 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC7.09□□□□□ -1.27
MRE11P49959 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
MRE11P49959 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC7.09□□□□□ -1.27
MRE11P49959 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
MRE11P49959 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.28
MRE11P49959 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC7.09□□□□□ -1.28
MRE11P49959 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.28
MRE11P49959 AL161756.3-201ENST00000641216 2071 ntBASIC7.08□□□□□ -1.28
MRE11P49959 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
MRE11P49959 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
MRE11P49959 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
MRE11P49959 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
MRE11P49959 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC7.08□□□□□ -1.28
MRE11P49959 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
MRE11P49959 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
MRE11P49959 RN7SKP128-201ENST00000364270 303 ntBASIC7.08□□□□□ -1.28
MRE11P49959 MIR105-2-201ENST00000385083 81 ntBASIC7.08□□□□□ -1.28
MRE11P49959 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
MRE11P49959 AL358178.1-201ENST00000407698 397 ntBASIC7.08□□□□□ -1.28
MRE11P49959 RNA5SP178-201ENST00000410380 128 ntBASIC7.08□□□□□ -1.28
MRE11P49959 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC7.08□□□□□ -1.28
MRE11P49959 AC106883.1-201ENST00000418805 562 ntBASIC7.08□□□□□ -1.28
MRE11P49959 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
MRE11P49959 GPN3P1-201ENST00000423883 535 ntBASIC7.08□□□□□ -1.28
MRE11P49959 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC7.08□□□□□ -1.28
MRE11P49959 AC138761.5-201ENST00000433967 325 ntBASIC7.08□□□□□ -1.28
MRE11P49959 RPL21P133-201ENST00000443666 476 ntBASIC7.08□□□□□ -1.28
MRE11P49959 AL096803.1-201ENST00000456921 1021 ntBASIC7.08□□□□□ -1.28
MRE11P49959 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC7.08□□□□□ -1.28
MRE11P49959 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC7.08□□□□□ -1.28
MRE11P49959 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC7.08□□□□□ -1.28
MRE11P49959 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC7.08□□□□□ -1.28
MRE11P49959 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC7.08□□□□□ -1.28
MRE11P49959 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC7.08□□□□□ -1.28
MRE11P49959 RPA2P3-201ENST00000533268 770 ntBASIC7.08□□□□□ -1.28
MRE11P49959 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC7.08□□□□□ -1.28
MRE11P49959 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC7.08□□□□□ -1.28
MRE11P49959 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC7.08□□□□□ -1.28
MRE11P49959 GNG2-203ENST00000553432 577 ntTSL 4 BASIC7.08□□□□□ -1.28
MRE11P49959 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC7.08□□□□□ -1.28
MRE11P49959 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC7.08□□□□□ -1.28
MRE11P49959 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
MRE11P49959 AC002519.2-203ENST00000567043 837 ntBASIC7.08□□□□□ -1.28
MRE11P49959 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC7.08□□□□□ -1.28
MRE11P49959 CCL2-202ENST00000580907 736 ntTSL 2 BASIC7.08□□□□□ -1.28
MRE11P49959 AC027229.1-201ENST00000583887 253 ntBASIC7.08□□□□□ -1.28
MRE11P49959 MTATP6P2-201ENST00000603319 678 ntBASIC7.08□□□□□ -1.28
MRE11P49959 AC093783.1-201ENST00000612976 329 ntBASIC7.08□□□□□ -1.28
MRE11P49959 CCT5-215ENST00000625723 135 ntTSL 5 BASIC7.08□□□□□ -1.28
MRE11P49959 TMEM30CP-203ENST00000637814 1035 ntBASIC7.08□□□□□ -1.28
MRE11P49959 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
MRE11P49959 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
MRE11P49959 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC7.08□□□□□ -1.28
MRE11P49959 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
MRE11P49959 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
MRE11P49959 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC7.08□□□□□ -1.28
MRE11P49959 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
MRE11P49959 AL121839.2-201ENST00000565058 6943 ntBASIC7.08□□□□□ -1.28
MRE11P49959 UGT2B24P-201ENST00000514441 1597 ntBASIC7.08□□□□□ -1.28
MRE11P49959 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
MRE11P49959 AC005224.3-201ENST00000584683 2140 ntBASIC7.07□□□□□ -1.28
MRE11P49959 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
MRE11P49959 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
MRE11P49959 AC011416.1-201ENST00000514947 1732 ntBASIC7.07□□□□□ -1.28
MRE11P49959 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms