Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC6.58□□□□□ -1.36
TOP1P11387 AC109309.2-201ENST00000612597 332 ntBASIC6.58□□□□□ -1.36
TOP1P11387 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC6.58□□□□□ -1.36
TOP1P11387 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
TOP1P11387 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
TOP1P11387 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
TOP1P11387 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
TOP1P11387 AL158152.1-201ENST00000602652 1435 ntBASIC6.58□□□□□ -1.36
TOP1P11387 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
TOP1P11387 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
TOP1P11387 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
TOP1P11387 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
TOP1P11387 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.57□□□□□ -1.36
TOP1P11387 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
TOP1P11387 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
TOP1P11387 RNU1-136P-201ENST00000384181 164 ntBASIC6.57□□□□□ -1.36
TOP1P11387 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
TOP1P11387 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC6.57□□□□□ -1.36
TOP1P11387 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC6.57□□□□□ -1.36
TOP1P11387 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC6.57□□□□□ -1.36
TOP1P11387 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC6.57□□□□□ -1.36
TOP1P11387 CYCSP51-201ENST00000443545 318 ntBASIC6.57□□□□□ -1.36
TOP1P11387 VDAC2P4-201ENST00000452925 711 ntBASIC6.57□□□□□ -1.36
TOP1P11387 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC6.57□□□□□ -1.36
TOP1P11387 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
TOP1P11387 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC6.57□□□□□ -1.36
TOP1P11387 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC6.57□□□□□ -1.36
TOP1P11387 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC6.57□□□□□ -1.36
TOP1P11387 AC021146.10-201ENST00000515628 706 ntBASIC6.57□□□□□ -1.36
TOP1P11387 OR8Q1P-201ENST00000526467 655 ntBASIC6.57□□□□□ -1.36
TOP1P11387 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC6.57□□□□□ -1.36
TOP1P11387 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.57□□□□□ -1.36
TOP1P11387 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC6.57□□□□□ -1.36
TOP1P11387 AC015720.2-201ENST00000567709 334 ntBASIC6.57□□□□□ -1.36
TOP1P11387 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC6.57□□□□□ -1.36
TOP1P11387 AC022467.1-201ENST00000614738 749 ntBASIC6.57□□□□□ -1.36
TOP1P11387 AC025574.2-201ENST00000615621 514 ntBASIC6.57□□□□□ -1.36
TOP1P11387 AC241377.1-201ENST00000619797 406 ntBASIC6.57□□□□□ -1.36
TOP1P11387 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC6.57□□□□□ -1.36
TOP1P11387 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC6.57□□□□□ -1.36
TOP1P11387 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.57□□□□□ -1.36
TOP1P11387 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.57□□□□□ -1.36
TOP1P11387 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
TOP1P11387 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
TOP1P11387 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
TOP1P11387 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
TOP1P11387 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
TOP1P11387 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
TOP1P11387 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
TOP1P11387 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
TOP1P11387 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
TOP1P11387 AC232271.1-201ENST00000602455 2715 ntBASIC6.56□□□□□ -1.36
TOP1P11387 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
TOP1P11387 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
TOP1P11387 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC6.56□□□□□ -1.36
TOP1P11387 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
TOP1P11387 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC6.56□□□□□ -1.36
TOP1P11387 RN7SKP160-201ENST00000363804 340 ntBASIC6.56□□□□□ -1.36
TOP1P11387 TRAV35-201ENST00000390462 330 ntBASIC6.56□□□□□ -1.36
TOP1P11387 RN7SKP229-201ENST00000410465 302 ntBASIC6.56□□□□□ -1.36
TOP1P11387 RNF10P1-201ENST00000418589 369 ntBASIC6.56□□□□□ -1.36
TOP1P11387 RPL5P2-201ENST00000429598 854 ntBASIC6.56□□□□□ -1.36
TOP1P11387 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
TOP1P11387 KRTAP8-2P-201ENST00000440620 186 ntBASIC6.56□□□□□ -1.36
TOP1P11387 AC019185.1-201ENST00000442718 389 ntBASIC6.56□□□□□ -1.36
TOP1P11387 AC073072.2-201ENST00000447425 348 ntBASIC6.56□□□□□ -1.36
TOP1P11387 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.56□□□□□ -1.36
TOP1P11387 AC090589.1-201ENST00000473109 362 ntBASIC6.56□□□□□ -1.36
TOP1P11387 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
TOP1P11387 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC6.56□□□□□ -1.36
TOP1P11387 ATP5LP3-201ENST00000514223 304 ntBASIC6.56□□□□□ -1.36
TOP1P11387 MIR3176-201ENST00000582210 90 ntBASIC6.56□□□□□ -1.36
TOP1P11387 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC6.56□□□□□ -1.36
TOP1P11387 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC6.56□□□□□ -1.36
TOP1P11387 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
TOP1P11387 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
TOP1P11387 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
TOP1P11387 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
TOP1P11387 NLRP3P1-201ENST00000622303 1785 ntBASIC6.56□□□□□ -1.36
TOP1P11387 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
TOP1P11387 OR5AQ1P-202ENST00000641257 1534 ntBASIC6.55□□□□□ -1.36
TOP1P11387 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
TOP1P11387 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
TOP1P11387 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
TOP1P11387 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
TOP1P11387 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC6.55□□□□□ -1.36
TOP1P11387 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
TOP1P11387 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.55□□□□□ -1.36
TOP1P11387 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
TOP1P11387 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.55□□□□□ -1.36
TOP1P11387 RN7SKP28-201ENST00000364770 305 ntBASIC6.55□□□□□ -1.36
TOP1P11387 SEPT7P2-202ENST00000398921 823 ntBASIC6.55□□□□□ -1.36
TOP1P11387 BX276092.6-201ENST00000430476 250 ntBASIC6.55□□□□□ -1.36
TOP1P11387 AL590399.4-201ENST00000436561 601 ntBASIC6.55□□□□□ -1.36
TOP1P11387 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC6.55□□□□□ -1.36
TOP1P11387 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC6.55□□□□□ -1.36
TOP1P11387 BX276092.8-201ENST00000455722 250 ntBASIC6.55□□□□□ -1.36
TOP1P11387 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC6.55□□□□□ -1.36
TOP1P11387 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC6.55□□□□□ -1.36
TOP1P11387 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms