Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 OR56A4-201ENST00000330728 1209 ntBASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 RN7SKP153-201ENST00000365026 316 ntBASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 KRBOX1-201ENST00000383748 674 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 RNU6-729P-201ENST00000384399 107 ntBASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 RN7SKP121-201ENST00000410842 305 ntBASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 RNA5SP39-201ENST00000411245 120 ntBASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 GSTM3P2-201ENST00000412746 530 ntBASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 CYP4F29P-201ENST00000420685 446 ntBASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 AL606490.3-201ENST00000422410 270 ntTSL 5 BASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 RPS27P18-201ENST00000431701 247 ntBASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 DAPK1-IT1-201ENST00000431813 702 ntTSL 3 BASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 DEFA9P-201ENST00000433042 285 ntBASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 RPS12P17-201ENST00000438591 377 ntBASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 PCNPP2-201ENST00000441651 455 ntBASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 AC023141.8-201ENST00000442554 208 ntBASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 C15orf40-202ENST00000451195 518 ntTSL 3 BASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 BX842559.2-201ENST00000451418 605 ntBASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 AL358876.1-201ENST00000453364 1075 ntBASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 AC019084.1-201ENST00000457337 432 ntBASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 RPL5P15-201ENST00000475870 897 ntBASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 RN7SL107P-201ENST00000478127 283 ntBASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 RN7SL700P-201ENST00000496982 294 ntBASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 CSNK1A1P3-201ENST00000504105 330 ntBASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 AC006070.1-201ENST00000508151 193 ntBASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 AL592156.1-201ENST00000508758 304 ntBASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 AC104123.1-202ENST00000511775 581 ntTSL 4 BASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 AC114947.1-201ENST00000511991 432 ntTSL 2 BASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 RFPL4AP3-201ENST00000515267 345 ntBASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 AC003991.2-201ENST00000520993 576 ntTSL 4 BASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 AC083973.1-201ENST00000523459 590 ntTSL 2 BASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 AC087241.3-201ENST00000542076 862 ntTSL 2 BASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 TMEM132D-AS1-207ENST00000542535 442 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 AC007068.2-201ENST00000543168 395 ntBASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 AL121694.1-201ENST00000554253 671 ntTSL 5 BASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 AL355989.2-201ENST00000603304 512 ntBASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 AC103858.2-201ENST00000621471 543 ntBASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 AL353608.4-201ENST00000624487 1188 ntBASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 MIR6715B-201ENST00000637172 77 ntBASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 AL672167.1-205ENST00000641112 3080 ntBASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 ECM1P2-201ENST00000503354 1577 ntBASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 R3HCC1L-206ENST00000613938 1397 ntTSL 5 BASIC2.74□□□□□ -1.97
LINC01558Q9Y6Z2 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 PLAG1-202ENST00000423799 1684 ntTSL 2 BASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 AC134882.1-201ENST00000603738 1676 ntBASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 AC090971.4-201ENST00000560291 1800 ntBASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 TGIF1-203ENST00000345133 1088 ntTSL 3 BASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 MIR365B-201ENST00000362317 111 ntBASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 TMED5-201ENST00000370280 750 ntTSL 2 BASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 TRAV17-201ENST00000390445 484 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 RNU6-1320P-201ENST00000390838 107 ntBASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 RNU6-1269P-201ENST00000391139 107 ntBASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 CASP2-203ENST00000392925 616 ntTSL 3 BASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 RN7SKP216-201ENST00000411050 312 ntBASIC2.73□□□□□ -1.97
LINC01558Q9Y6Z2 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms