Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 PROS2P-201ENST00000474651 1951 ntBASIC5.24□□□□□ -1.57
VAPAQ9P0L0 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.23□□□□□ -1.57
VAPAQ9P0L0 AC092376.2-201ENST00000622621 4116 ntBASIC5.23□□□□□ -1.57
VAPAQ9P0L0 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.23□□□□□ -1.57
VAPAQ9P0L0 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.23□□□□□ -1.57
VAPAQ9P0L0 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.23□□□□□ -1.57
VAPAQ9P0L0 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
VAPAQ9P0L0 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
VAPAQ9P0L0 AL078621.3-201ENST00000623707 2042 ntBASIC5.23□□□□□ -1.57
VAPAQ9P0L0 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.23□□□□□ -1.57
VAPAQ9P0L0 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
VAPAQ9P0L0 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
VAPAQ9P0L0 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
VAPAQ9P0L0 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
VAPAQ9P0L0 RNA5SP232-201ENST00000364144 119 ntBASIC5.23□□□□□ -1.57
VAPAQ9P0L0 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
VAPAQ9P0L0 RNA5SP241-201ENST00000391326 114 ntBASIC5.23□□□□□ -1.57
VAPAQ9P0L0 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.23□□□□□ -1.57
VAPAQ9P0L0 AC013410.1-201ENST00000436223 1232 ntBASIC5.23□□□□□ -1.57
VAPAQ9P0L0 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC5.23□□□□□ -1.57
VAPAQ9P0L0 AC006335.2-201ENST00000437993 330 ntBASIC5.23□□□□□ -1.57
VAPAQ9P0L0 AC068491.1-201ENST00000449539 1241 ntBASIC5.23□□□□□ -1.57
VAPAQ9P0L0 NPM1P19-201ENST00000450070 712 ntBASIC5.23□□□□□ -1.57
VAPAQ9P0L0 RN7SL72P-201ENST00000460697 269 ntBASIC5.23□□□□□ -1.57
VAPAQ9P0L0 AC068228.1-201ENST00000461723 211 ntBASIC5.23□□□□□ -1.57
VAPAQ9P0L0 AC135999.1-201ENST00000478962 479 ntBASIC5.23□□□□□ -1.57
VAPAQ9P0L0 AC044810.1-201ENST00000480271 711 ntBASIC5.23□□□□□ -1.57
VAPAQ9P0L0 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.23□□□□□ -1.57
VAPAQ9P0L0 AC092709.1-201ENST00000521355 1045 ntBASIC5.23□□□□□ -1.57
VAPAQ9P0L0 AC079905.1-201ENST00000549280 475 ntBASIC5.23□□□□□ -1.57
VAPAQ9P0L0 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
VAPAQ9P0L0 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.23□□□□□ -1.57
VAPAQ9P0L0 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.23□□□□□ -1.57
VAPAQ9P0L0 AC092944.2-201ENST00000605443 889 ntBASIC5.23□□□□□ -1.57
VAPAQ9P0L0 MIR6813-201ENST00000621638 56 ntBASIC5.23□□□□□ -1.57
VAPAQ9P0L0 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.23□□□□□ -1.57
VAPAQ9P0L0 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.23□□□□□ -1.57
VAPAQ9P0L0 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
VAPAQ9P0L0 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
VAPAQ9P0L0 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
VAPAQ9P0L0 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.23□□□□□ -1.57
VAPAQ9P0L0 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
VAPAQ9P0L0 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.23□□□□□ -1.57
VAPAQ9P0L0 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
VAPAQ9P0L0 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
VAPAQ9P0L0 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
VAPAQ9P0L0 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
VAPAQ9P0L0 LYARP1-201ENST00000436977 1501 ntBASIC5.23□□□□□ -1.57
VAPAQ9P0L0 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
VAPAQ9P0L0 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VAPAQ9P0L0 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
VAPAQ9P0L0 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
VAPAQ9P0L0 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VAPAQ9P0L0 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VAPAQ9P0L0 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.22□□□□□ -1.57
VAPAQ9P0L0 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
VAPAQ9P0L0 RN7SKP184-201ENST00000362348 333 ntBASIC5.22□□□□□ -1.57
VAPAQ9P0L0 RNA5SP477-201ENST00000362639 119 ntBASIC5.22□□□□□ -1.57
VAPAQ9P0L0 RN7SKP171-201ENST00000364417 303 ntBASIC5.22□□□□□ -1.57
VAPAQ9P0L0 RN7SKP81-201ENST00000365603 331 ntBASIC5.22□□□□□ -1.57
VAPAQ9P0L0 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VAPAQ9P0L0 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.22□□□□□ -1.57
VAPAQ9P0L0 GNG5P5-201ENST00000420444 220 ntBASIC5.22□□□□□ -1.57
VAPAQ9P0L0 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.22□□□□□ -1.57
VAPAQ9P0L0 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
VAPAQ9P0L0 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC5.22□□□□□ -1.57
VAPAQ9P0L0 AL358876.1-201ENST00000453364 1075 ntBASIC5.22□□□□□ -1.57
VAPAQ9P0L0 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC5.22□□□□□ -1.57
VAPAQ9P0L0 RPS3AP15-201ENST00000483874 781 ntBASIC5.22□□□□□ -1.57
VAPAQ9P0L0 IGBP1P4-201ENST00000503202 879 ntBASIC5.22□□□□□ -1.57
VAPAQ9P0L0 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC5.22□□□□□ -1.57
VAPAQ9P0L0 GOLGA5P1-201ENST00000507317 980 ntBASIC5.22□□□□□ -1.57
VAPAQ9P0L0 RNU6-1334P-201ENST00000516032 105 ntBASIC5.22□□□□□ -1.57
VAPAQ9P0L0 SCARNA20.4-201ENST00000516969 131 ntBASIC5.22□□□□□ -1.57
VAPAQ9P0L0 RNA5SP230-201ENST00000517039 122 ntBASIC5.22□□□□□ -1.57
VAPAQ9P0L0 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.22□□□□□ -1.57
VAPAQ9P0L0 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.22□□□□□ -1.57
VAPAQ9P0L0 DPPA2P4-201ENST00000563717 878 ntBASIC5.22□□□□□ -1.57
VAPAQ9P0L0 LINC00556-201ENST00000569603 412 ntBASIC5.22□□□□□ -1.57
VAPAQ9P0L0 AC025574.2-201ENST00000615621 514 ntBASIC5.22□□□□□ -1.57
VAPAQ9P0L0 uc_338.7-201ENST00000621834 124 ntBASIC5.22□□□□□ -1.57
VAPAQ9P0L0 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
VAPAQ9P0L0 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
VAPAQ9P0L0 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VAPAQ9P0L0 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
VAPAQ9P0L0 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VAPAQ9P0L0 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.22□□□□□ -1.57
VAPAQ9P0L0 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.22□□□□□ -1.57
VAPAQ9P0L0 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.22□□□□□ -1.57
VAPAQ9P0L0 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VAPAQ9P0L0 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.22□□□□□ -1.57
VAPAQ9P0L0 MRE11P1-201ENST00000464884 2127 ntBASIC5.21□□□□□ -1.57
VAPAQ9P0L0 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.57
VAPAQ9P0L0 Z83820.1-201ENST00000456978 1499 ntBASIC5.21□□□□□ -1.58
VAPAQ9P0L0 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
VAPAQ9P0L0 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
VAPAQ9P0L0 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
VAPAQ9P0L0 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VAPAQ9P0L0 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.21□□□□□ -1.58
VAPAQ9P0L0 TCP11X1-202ENST00000622971 1372 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms