Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 CRIP1P1-201ENST00000427567 185 ntBASIC5.47□□□□□ -1.53
CDH12P55289 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.47□□□□□ -1.53
CDH12P55289 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.47□□□□□ -1.53
CDH12P55289 RPS26P4-201ENST00000431743 355 ntBASIC5.47□□□□□ -1.53
CDH12P55289 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
CDH12P55289 AC096632.2-201ENST00000438139 1239 ntBASIC5.47□□□□□ -1.53
CDH12P55289 AL663074.2-201ENST00000440621 479 ntBASIC5.47□□□□□ -1.53
CDH12P55289 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.47□□□□□ -1.53
CDH12P55289 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC5.47□□□□□ -1.53
CDH12P55289 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.47□□□□□ -1.53
CDH12P55289 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.47□□□□□ -1.53
CDH12P55289 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.47□□□□□ -1.53
CDH12P55289 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC5.47□□□□□ -1.53
CDH12P55289 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC5.47□□□□□ -1.53
CDH12P55289 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC5.47□□□□□ -1.53
CDH12P55289 MTND2P6-201ENST00000455337 1030 ntBASIC5.47□□□□□ -1.53
CDH12P55289 AC005017.1-201ENST00000482002 490 ntBASIC5.47□□□□□ -1.53
CDH12P55289 PDCL3P4-201ENST00000489621 720 ntBASIC5.47□□□□□ -1.53
CDH12P55289 AC083795.1-201ENST00000491760 320 ntBASIC5.47□□□□□ -1.53
CDH12P55289 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.47□□□□□ -1.53
CDH12P55289 HMGN1P17-201ENST00000513734 295 ntBASIC5.47□□□□□ -1.53
CDH12P55289 AC111000.6-201ENST00000514471 709 ntBASIC5.47□□□□□ -1.53
CDH12P55289 MRPS5P3-201ENST00000515577 166 ntBASIC5.47□□□□□ -1.53
CDH12P55289 RNU6-319P-201ENST00000516025 108 ntBASIC5.47□□□□□ -1.53
CDH12P55289 AC067904.2-201ENST00000517322 1283 ntBASIC5.47□□□□□ -1.53
CDH12P55289 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC5.47□□□□□ -1.53
CDH12P55289 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.47□□□□□ -1.53
CDH12P55289 AP001000.1-201ENST00000526843 742 ntBASIC5.47□□□□□ -1.53
CDH12P55289 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.47□□□□□ -1.53
CDH12P55289 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CDH12P55289 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC5.47□□□□□ -1.53
CDH12P55289 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.47□□□□□ -1.53
CDH12P55289 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.47□□□□□ -1.53
CDH12P55289 ZNF322P1-201ENST00000568013 1209 ntBASIC5.47□□□□□ -1.53
CDH12P55289 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.47□□□□□ -1.53
CDH12P55289 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.47□□□□□ -1.53
CDH12P55289 AL513327.3-201ENST00000602618 469 ntBASIC5.47□□□□□ -1.53
CDH12P55289 AC096947.1-201ENST00000603233 470 ntBASIC5.47□□□□□ -1.53
CDH12P55289 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.47□□□□□ -1.53
CDH12P55289 AC015819.1-201ENST00000613588 663 ntBASIC5.47□□□□□ -1.53
CDH12P55289 AL357562.1-201ENST00000624911 609 ntBASIC5.47□□□□□ -1.53
CDH12P55289 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC5.47□□□□□ -1.53
CDH12P55289 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC5.47□□□□□ -1.53
CDH12P55289 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.47□□□□□ -1.53
CDH12P55289 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.47□□□□□ -1.53
CDH12P55289 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CDH12P55289 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.47□□□□□ -1.53
CDH12P55289 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.47□□□□□ -1.53
CDH12P55289 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
CDH12P55289 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CDH12P55289 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CDH12P55289 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.47□□□□□ -1.53
CDH12P55289 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CDH12P55289 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CDH12P55289 AP000432.2-201ENST00000624164 2048 ntBASIC5.47□□□□□ -1.53
CDH12P55289 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.46□□□□□ -1.53
CDH12P55289 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.46□□□□□ -1.53
CDH12P55289 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
CDH12P55289 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CDH12P55289 AL137058.3-201ENST00000624531 3099 ntBASIC5.46□□□□□ -1.54
CDH12P55289 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
CDH12P55289 RNU1-134P-201ENST00000362935 165 ntBASIC5.46□□□□□ -1.54
CDH12P55289 RPL11P3-201ENST00000395256 523 ntBASIC5.46□□□□□ -1.54
CDH12P55289 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
CDH12P55289 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CDH12P55289 RN7SKP146-201ENST00000410242 334 ntBASIC5.46□□□□□ -1.54
CDH12P55289 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.46□□□□□ -1.54
CDH12P55289 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.46□□□□□ -1.54
CDH12P55289 AC092570.3-201ENST00000420113 693 ntBASIC5.46□□□□□ -1.54
CDH12P55289 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CDH12P55289 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC5.46□□□□□ -1.54
CDH12P55289 AC092865.3-201ENST00000425390 1026 ntBASIC5.46□□□□□ -1.54
CDH12P55289 AC130360.1-201ENST00000425489 1117 ntBASIC5.46□□□□□ -1.54
CDH12P55289 AC099782.1-201ENST00000425889 474 ntBASIC5.46□□□□□ -1.54
CDH12P55289 AC099677.3-201ENST00000427081 395 ntBASIC5.46□□□□□ -1.54
CDH12P55289 AL512637.2-201ENST00000431287 1256 ntBASIC5.46□□□□□ -1.54
CDH12P55289 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC5.46□□□□□ -1.54
CDH12P55289 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.46□□□□□ -1.54
CDH12P55289 AC010240.2-201ENST00000445363 1205 ntBASIC5.46□□□□□ -1.54
CDH12P55289 FTLP8-201ENST00000446770 267 ntBASIC5.46□□□□□ -1.54
CDH12P55289 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5.46□□□□□ -1.54
CDH12P55289 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC5.46□□□□□ -1.54
CDH12P55289 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC5.46□□□□□ -1.54
CDH12P55289 RPS27P20-201ENST00000492051 246 ntBASIC5.46□□□□□ -1.54
CDH12P55289 AP002453.1-201ENST00000492327 668 ntBASIC5.46□□□□□ -1.54
CDH12P55289 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.46□□□□□ -1.54
CDH12P55289 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CDH12P55289 MTCO1P31-201ENST00000506355 492 ntBASIC5.46□□□□□ -1.54
CDH12P55289 AC010460.2-201ENST00000509054 677 ntBASIC5.46□□□□□ -1.54
CDH12P55289 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC5.46□□□□□ -1.54
CDH12P55289 AC097486.1-201ENST00000515331 210 ntBASIC5.46□□□□□ -1.54
CDH12P55289 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
CDH12P55289 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CDH12P55289 AC130365.2-201ENST00000525882 1201 ntBASIC5.46□□□□□ -1.54
CDH12P55289 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CDH12P55289 OR8X1P-201ENST00000534542 869 ntBASIC5.46□□□□□ -1.54
CDH12P55289 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.46□□□□□ -1.54
CDH12P55289 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
CDH12P55289 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.46□□□□□ -1.54
CDH12P55289 MRPS21P8-201ENST00000569196 235 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms