Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PDX1P52945 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
PDX1P52945 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PDX1P52945 GNG5P2-201ENST00000372054 207 ntBASIC5.61□□□□□ -1.51
PDX1P52945 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PDX1P52945 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
PDX1P52945 RN7SKP166-201ENST00000410812 305 ntBASIC5.61□□□□□ -1.51
PDX1P52945 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.61□□□□□ -1.51
PDX1P52945 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.61□□□□□ -1.51
PDX1P52945 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.61□□□□□ -1.51
PDX1P52945 TNPO1P1-201ENST00000423641 1138 ntBASIC5.61□□□□□ -1.51
PDX1P52945 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PDX1P52945 AL022331.1-201ENST00000429025 477 ntBASIC5.61□□□□□ -1.51
PDX1P52945 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC5.61□□□□□ -1.51
PDX1P52945 CFL1P1-202ENST00000432948 411 ntBASIC5.61□□□□□ -1.51
PDX1P52945 AL627308.1-201ENST00000435693 821 ntBASIC5.61□□□□□ -1.51
PDX1P52945 SPRYD7P1-201ENST00000443861 570 ntBASIC5.61□□□□□ -1.51
PDX1P52945 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
PDX1P52945 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PDX1P52945 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PDX1P52945 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PDX1P52945 RPL23AP40-201ENST00000487630 390 ntBASIC5.61□□□□□ -1.51
PDX1P52945 OR2A3P-201ENST00000493774 953 ntBASIC5.61□□□□□ -1.51
PDX1P52945 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.61□□□□□ -1.51
PDX1P52945 CCDC11P1-201ENST00000503137 1162 ntBASIC5.61□□□□□ -1.51
PDX1P52945 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.61□□□□□ -1.51
PDX1P52945 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PDX1P52945 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
PDX1P52945 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
PDX1P52945 AC002456.2-201ENST00000509356 380 ntBASIC5.61□□□□□ -1.51
PDX1P52945 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.61□□□□□ -1.51
PDX1P52945 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.61□□□□□ -1.51
PDX1P52945 MRPS16P1-201ENST00000523462 412 ntBASIC5.61□□□□□ -1.51
PDX1P52945 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.61□□□□□ -1.51
PDX1P52945 AC244502.2-201ENST00000543361 851 ntBASIC5.61□□□□□ -1.51
PDX1P52945 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.61□□□□□ -1.51
PDX1P52945 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.61□□□□□ -1.51
PDX1P52945 GARSP1-201ENST00000570895 719 ntBASIC5.61□□□□□ -1.51
PDX1P52945 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.61□□□□□ -1.51
PDX1P52945 AC107993.1-201ENST00000591343 684 ntBASIC5.61□□□□□ -1.51
PDX1P52945 AC145423.1-201ENST00000605712 336 ntBASIC5.61□□□□□ -1.51
PDX1P52945 AC211433.2-201ENST00000608433 387 ntBASIC5.61□□□□□ -1.51
PDX1P52945 AC096586.2-201ENST00000610260 441 ntBASIC5.61□□□□□ -1.51
PDX1P52945 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC5.61□□□□□ -1.51
PDX1P52945 AC016769.4-201ENST00000616893 535 ntBASIC5.61□□□□□ -1.51
PDX1P52945 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PDX1P52945 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.61□□□□□ -1.51
PDX1P52945 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.61□□□□□ -1.51
PDX1P52945 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PDX1P52945 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.61□□□□□ -1.51
PDX1P52945 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
PDX1P52945 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PDX1P52945 MRE11P1-201ENST00000464884 2127 ntBASIC5.6□□□□□ -1.51
PDX1P52945 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.6□□□□□ -1.51
PDX1P52945 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.6□□□□□ -1.51
PDX1P52945 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.6□□□□□ -1.51
PDX1P52945 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.6□□□□□ -1.51
PDX1P52945 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
PDX1P52945 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.6□□□□□ -1.51
PDX1P52945 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PDX1P52945 AC109780.1-201ENST00000451768 1344 ntBASIC5.6□□□□□ -1.51
PDX1P52945 RNU6-891P-201ENST00000384280 111 ntBASIC5.6□□□□□ -1.51
PDX1P52945 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PDX1P52945 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.6□□□□□ -1.51
PDX1P52945 AL390879.1-201ENST00000439143 386 ntBASIC5.6□□□□□ -1.51
PDX1P52945 BX679664.2-201ENST00000439282 283 ntBASIC5.6□□□□□ -1.51
PDX1P52945 AL390119.1-201ENST00000440329 312 ntBASIC5.6□□□□□ -1.51
PDX1P52945 BTBD7P2-201ENST00000441962 620 ntBASIC5.6□□□□□ -1.51
PDX1P52945 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.6□□□□□ -1.51
PDX1P52945 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC5.6□□□□□ -1.51
PDX1P52945 RN7SL727P-201ENST00000482164 296 ntBASIC5.6□□□□□ -1.51
PDX1P52945 PPP1R11P1-201ENST00000486095 376 ntBASIC5.6□□□□□ -1.51
PDX1P52945 AC009120.1-201ENST00000493458 473 ntBASIC5.6□□□□□ -1.51
PDX1P52945 AC021146.10-201ENST00000515628 706 ntBASIC5.6□□□□□ -1.51
PDX1P52945 IGLV2-28-201ENST00000520681 304 ntBASIC5.6□□□□□ -1.51
PDX1P52945 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.6□□□□□ -1.51
PDX1P52945 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC5.6□□□□□ -1.51
PDX1P52945 IGBP1P1-201ENST00000554337 1009 ntBASIC5.6□□□□□ -1.51
PDX1P52945 AL049872.1-201ENST00000556323 322 ntBASIC5.6□□□□□ -1.51
PDX1P52945 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.6□□□□□ -1.51
PDX1P52945 AL049779.3-201ENST00000557141 606 ntBASIC5.6□□□□□ -1.51
PDX1P52945 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.6□□□□□ -1.51
PDX1P52945 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC5.6□□□□□ -1.51
PDX1P52945 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PDX1P52945 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC5.6□□□□□ -1.51
PDX1P52945 MIR1269B-201ENST00000580405 75 ntBASIC5.6□□□□□ -1.51
PDX1P52945 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.6□□□□□ -1.51
PDX1P52945 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.6□□□□□ -1.51
PDX1P52945 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.6□□□□□ -1.51
PDX1P52945 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PDX1P52945 AC004808.2-201ENST00000627965 773 ntBASIC5.6□□□□□ -1.51
PDX1P52945 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.6□□□□□ -1.51
PDX1P52945 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.6□□□□□ -1.51
PDX1P52945 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.6□□□□□ -1.51
PDX1P52945 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.6□□□□□ -1.51
PDX1P52945 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PDX1P52945 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PDX1P52945 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PDX1P52945 LINC02019-201ENST00000608605 2060 ntBASIC5.6□□□□□ -1.51
PDX1P52945 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms