Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 RNU6-618P-201ENST00000363518 112 ntBASIC6.22□□□□□ -1.41
HOXD13P35453 OR13C3-201ENST00000374781 1108 ntBASIC6.22□□□□□ -1.41
HOXD13P35453 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
HOXD13P35453 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC6.22□□□□□ -1.41
HOXD13P35453 RPS6P23-201ENST00000413224 722 ntBASIC6.22□□□□□ -1.41
HOXD13P35453 AC234781.4-201ENST00000419384 244 ntBASIC6.22□□□□□ -1.41
HOXD13P35453 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC6.22□□□□□ -1.41
HOXD13P35453 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HOXD13P35453 IPPKP1-201ENST00000422501 768 ntBASIC6.22□□□□□ -1.41
HOXD13P35453 AL662874.1-201ENST00000426065 230 ntBASIC6.22□□□□□ -1.41
HOXD13P35453 AC239798.3-201ENST00000454459 408 ntBASIC6.22□□□□□ -1.41
HOXD13P35453 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC6.22□□□□□ -1.41
HOXD13P35453 AC022215.1-201ENST00000481770 362 ntBASIC6.22□□□□□ -1.41
HOXD13P35453 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC6.22□□□□□ -1.41
HOXD13P35453 RPS17P5-201ENST00000498293 408 ntBASIC6.22□□□□□ -1.41
HOXD13P35453 AC090058.1-201ENST00000498788 435 ntBASIC6.22□□□□□ -1.41
HOXD13P35453 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6.22□□□□□ -1.41
HOXD13P35453 SNORD46.2-201ENST00000516021 102 ntBASIC6.22□□□□□ -1.41
HOXD13P35453 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC6.22□□□□□ -1.41
HOXD13P35453 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC6.22□□□□□ -1.41
HOXD13P35453 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
HOXD13P35453 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.22□□□□□ -1.41
HOXD13P35453 MEG8-217ENST00000556637 924 ntTSL 5 BASIC6.22□□□□□ -1.41
HOXD13P35453 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.22□□□□□ -1.41
HOXD13P35453 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC6.22□□□□□ -1.41
HOXD13P35453 AC008833.1-201ENST00000611633 691 ntBASIC6.22□□□□□ -1.41
HOXD13P35453 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HOXD13P35453 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
HOXD13P35453 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.22□□□□□ -1.41
HOXD13P35453 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HOXD13P35453 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HOXD13P35453 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.22□□□□□ -1.41
HOXD13P35453 AC106872.5-201ENST00000508856 1416 ntBASIC6.22□□□□□ -1.41
HOXD13P35453 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HOXD13P35453 UGT2B24P-201ENST00000514441 1597 ntBASIC6.22□□□□□ -1.41
HOXD13P35453 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.22□□□□□ -1.41
HOXD13P35453 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
HOXD13P35453 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.22□□□□□ -1.41
HOXD13P35453 AC087516.1-201ENST00000561236 2428 ntBASIC6.21□□□□□ -1.41
HOXD13P35453 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
HOXD13P35453 FGG-205ENST00000407946 1636 ntTSL 5 BASIC6.21□□□□□ -1.41
HOXD13P35453 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC6.21□□□□□ -1.41
HOXD13P35453 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.21□□□□□ -1.41
HOXD13P35453 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.21□□□□□ -1.41
HOXD13P35453 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.21□□□□□ -1.41
HOXD13P35453 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
HOXD13P35453 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
HOXD13P35453 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.41
HOXD13P35453 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HOXD13P35453 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
HOXD13P35453 HSPD1P7-201ENST00000447985 1686 ntBASIC6.21□□□□□ -1.42
HOXD13P35453 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HOXD13P35453 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
HOXD13P35453 RNA5SP131-201ENST00000365452 119 ntBASIC6.21□□□□□ -1.42
HOXD13P35453 AC083799.1-201ENST00000366451 910 ntBASIC6.21□□□□□ -1.42
HOXD13P35453 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC6.21□□□□□ -1.42
HOXD13P35453 RPL11P3-201ENST00000395256 523 ntBASIC6.21□□□□□ -1.42
HOXD13P35453 AL607077.1-201ENST00000401718 499 ntBASIC6.21□□□□□ -1.42
HOXD13P35453 RPS3AP2-201ENST00000407190 754 ntBASIC6.21□□□□□ -1.42
HOXD13P35453 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC6.21□□□□□ -1.42
HOXD13P35453 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.21□□□□□ -1.42
HOXD13P35453 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HOXD13P35453 RPS3P2-201ENST00000421346 701 ntBASIC6.21□□□□□ -1.42
HOXD13P35453 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.21□□□□□ -1.42
HOXD13P35453 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC6.21□□□□□ -1.42
HOXD13P35453 RPL31P20-201ENST00000449593 360 ntBASIC6.21□□□□□ -1.42
HOXD13P35453 AC094085.1-201ENST00000468914 584 ntBASIC6.21□□□□□ -1.42
HOXD13P35453 OR9N1P-201ENST00000491296 333 ntBASIC6.21□□□□□ -1.42
HOXD13P35453 AC022826.1-201ENST00000519383 805 ntBASIC6.21□□□□□ -1.42
HOXD13P35453 AC136777.2-201ENST00000522979 358 ntBASIC6.21□□□□□ -1.42
HOXD13P35453 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC6.21□□□□□ -1.42
HOXD13P35453 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC6.21□□□□□ -1.42
HOXD13P35453 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.21□□□□□ -1.42
HOXD13P35453 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC6.21□□□□□ -1.42
HOXD13P35453 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC6.21□□□□□ -1.42
HOXD13P35453 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC6.21□□□□□ -1.42
HOXD13P35453 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.21□□□□□ -1.42
HOXD13P35453 AC009237.13-201ENST00000603193 276 ntBASIC6.21□□□□□ -1.42
HOXD13P35453 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.21□□□□□ -1.42
HOXD13P35453 AC087565.3-203ENST00000641018 837 ntBASIC6.21□□□□□ -1.42
HOXD13P35453 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.21□□□□□ -1.42
HOXD13P35453 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC6.21□□□□□ -1.42
HOXD13P35453 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC6.21□□□□□ -1.42
HOXD13P35453 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HOXD13P35453 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HOXD13P35453 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HOXD13P35453 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HOXD13P35453 CDC27P2-201ENST00000425026 1922 ntBASIC6.21□□□□□ -1.42
HOXD13P35453 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.21□□□□□ -1.42
HOXD13P35453 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXD13P35453 AC104964.3-201ENST00000606115 2860 ntBASIC6.2□□□□□ -1.42
HOXD13P35453 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
HOXD13P35453 AC083899.1-201ENST00000454465 3819 ntBASIC6.2□□□□□ -1.42
HOXD13P35453 AC140134.1-201ENST00000511830 3544 ntBASIC6.2□□□□□ -1.42
HOXD13P35453 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.2□□□□□ -1.42
HOXD13P35453 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC6.2□□□□□ -1.42
HOXD13P35453 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXD13P35453 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC6.2□□□□□ -1.42
HOXD13P35453 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HOXD13P35453 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms