Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.42□□□□□ -1.54
CLDN9O95484 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.42□□□□□ -1.54
CLDN9O95484 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.42□□□□□ -1.54
CLDN9O95484 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.42□□□□□ -1.54
CLDN9O95484 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.42□□□□□ -1.54
CLDN9O95484 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.42□□□□□ -1.54
CLDN9O95484 AC083899.1-201ENST00000454465 3819 ntBASIC5.42□□□□□ -1.54
CLDN9O95484 ABCC13-202ENST00000463099 3842 ntBASIC5.42□□□□□ -1.54
CLDN9O95484 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
CLDN9O95484 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CLDN9O95484 MT-RNR2-201ENST00000387347 1559 ntBASIC5.42□□□□□ -1.54
CLDN9O95484 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.42□□□□□ -1.54
CLDN9O95484 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLDN9O95484 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
CLDN9O95484 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLDN9O95484 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.41□□□□□ -1.54
CLDN9O95484 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLDN9O95484 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLDN9O95484 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CLDN9O95484 SNORA64.1-201ENST00000362600 132 ntBASIC5.41□□□□□ -1.54
CLDN9O95484 RPS3AP2-201ENST00000407190 754 ntBASIC5.41□□□□□ -1.54
CLDN9O95484 AC245060.4-201ENST00000413293 1121 ntBASIC5.41□□□□□ -1.54
CLDN9O95484 AC013268.2-201ENST00000420753 337 ntBASIC5.41□□□□□ -1.54
CLDN9O95484 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.41□□□□□ -1.54
CLDN9O95484 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.41□□□□□ -1.54
CLDN9O95484 AP006222.1-205ENST00000450734 457 ntBASIC5.41□□□□□ -1.54
CLDN9O95484 AC012123.2-201ENST00000485809 248 ntBASIC5.41□□□□□ -1.54
CLDN9O95484 GOLGA5P1-201ENST00000507317 980 ntBASIC5.41□□□□□ -1.54
CLDN9O95484 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.41□□□□□ -1.54
CLDN9O95484 AC026782.2-201ENST00000510845 636 ntBASIC5.41□□□□□ -1.54
CLDN9O95484 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CLDN9O95484 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC5.41□□□□□ -1.54
CLDN9O95484 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.41□□□□□ -1.54
CLDN9O95484 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.41□□□□□ -1.54
CLDN9O95484 MIR4433B-201ENST00000581329 102 ntBASIC5.41□□□□□ -1.54
CLDN9O95484 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.41□□□□□ -1.54
CLDN9O95484 AC018809.2-201ENST00000602436 3823 ntBASIC5.41□□□□□ -1.54
CLDN9O95484 LSM1P2-201ENST00000604911 322 ntBASIC5.41□□□□□ -1.54
CLDN9O95484 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.41□□□□□ -1.54
CLDN9O95484 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.41□□□□□ -1.54
CLDN9O95484 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.41□□□□□ -1.54
CLDN9O95484 AC144833.1-201ENST00000567953 4089 ntBASIC5.41□□□□□ -1.54
CLDN9O95484 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CLDN9O95484 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.41□□□□□ -1.54
CLDN9O95484 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.41□□□□□ -1.54
CLDN9O95484 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLDN9O95484 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.41□□□□□ -1.54
CLDN9O95484 AC079097.1-201ENST00000512187 1399 ntBASIC5.41□□□□□ -1.54
CLDN9O95484 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLDN9O95484 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CLDN9O95484 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
CLDN9O95484 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.4□□□□□ -1.54
CLDN9O95484 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
CLDN9O95484 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
CLDN9O95484 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CLDN9O95484 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
CLDN9O95484 MIR375-201ENST00000362103 64 ntBASIC5.4□□□□□ -1.54
CLDN9O95484 RN7SKP145-201ENST00000363291 303 ntBASIC5.4□□□□□ -1.54
CLDN9O95484 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
CLDN9O95484 SNORA70.6-201ENST00000383934 134 ntBASIC5.4□□□□□ -1.54
CLDN9O95484 NPM1P37-201ENST00000403105 874 ntBASIC5.4□□□□□ -1.54
CLDN9O95484 RMRPP5-201ENST00000411156 267 ntBASIC5.4□□□□□ -1.54
CLDN9O95484 DPPA2P2-201ENST00000418220 897 ntBASIC5.4□□□□□ -1.54
CLDN9O95484 AC127526.2-201ENST00000426436 775 ntBASIC5.4□□□□□ -1.54
CLDN9O95484 RPS27AP6-201ENST00000427962 448 ntBASIC5.4□□□□□ -1.54
CLDN9O95484 RPL7P56-201ENST00000429441 717 ntBASIC5.4□□□□□ -1.54
CLDN9O95484 RPL5P2-201ENST00000429598 854 ntBASIC5.4□□□□□ -1.54
CLDN9O95484 AC006335.2-201ENST00000437993 330 ntBASIC5.4□□□□□ -1.54
CLDN9O95484 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.4□□□□□ -1.54
CLDN9O95484 MED28P3-201ENST00000444288 531 ntBASIC5.4□□□□□ -1.54
CLDN9O95484 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.4□□□□□ -1.54
CLDN9O95484 AZGP1P2-201ENST00000454506 345 ntBASIC5.4□□□□□ -1.54
CLDN9O95484 PFN1P8-201ENST00000497012 543 ntBASIC5.4□□□□□ -1.54
CLDN9O95484 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.4□□□□□ -1.54
CLDN9O95484 RN7SKP70-201ENST00000516655 271 ntBASIC5.4□□□□□ -1.54
CLDN9O95484 RNA5SP271-201ENST00000516700 88 ntBASIC5.4□□□□□ -1.54
CLDN9O95484 MRPS16P1-201ENST00000523462 412 ntBASIC5.4□□□□□ -1.54
CLDN9O95484 TOMM20P1-201ENST00000534518 427 ntBASIC5.4□□□□□ -1.54
CLDN9O95484 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.4□□□□□ -1.54
CLDN9O95484 DPPA2P4-201ENST00000563717 878 ntBASIC5.4□□□□□ -1.54
CLDN9O95484 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.4□□□□□ -1.54
CLDN9O95484 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.4□□□□□ -1.54
CLDN9O95484 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.4□□□□□ -1.54
CLDN9O95484 AC015802.2-201ENST00000589690 189 ntBASIC5.4□□□□□ -1.54
CLDN9O95484 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.4□□□□□ -1.54
CLDN9O95484 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.4□□□□□ -1.54
CLDN9O95484 AC067773.1-201ENST00000603284 1094 ntBASIC5.4□□□□□ -1.54
CLDN9O95484 MIR6861-201ENST00000618657 64 ntBASIC5.4□□□□□ -1.54
CLDN9O95484 AC021766.1-201ENST00000624404 741 ntBASIC5.4□□□□□ -1.54
CLDN9O95484 AC087565.3-203ENST00000641018 837 ntBASIC5.4□□□□□ -1.54
CLDN9O95484 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
CLDN9O95484 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CLDN9O95484 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CLDN9O95484 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CLDN9O95484 AC006206.1-201ENST00000544842 3387 ntBASIC5.4□□□□□ -1.55
CLDN9O95484 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CLDN9O95484 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CLDN9O95484 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CLDN9O95484 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.4□□□□□ -1.55
CLDN9O95484 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms