Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 FAM204CP-201ENST00000424489 642 ntBASIC6.16□□□□□ -1.42
SNX9Q9Y5X1 AL662874.1-201ENST00000426065 230 ntBASIC6.16□□□□□ -1.42
SNX9Q9Y5X1 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC6.16□□□□□ -1.42
SNX9Q9Y5X1 UBE2V2P1-201ENST00000434717 398 ntBASIC6.16□□□□□ -1.42
SNX9Q9Y5X1 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.16□□□□□ -1.42
SNX9Q9Y5X1 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC6.16□□□□□ -1.42
SNX9Q9Y5X1 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.16□□□□□ -1.42
SNX9Q9Y5X1 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC6.16□□□□□ -1.42
SNX9Q9Y5X1 OR7E116P-201ENST00000448529 957 ntBASIC6.16□□□□□ -1.42
SNX9Q9Y5X1 LRRC37A14P-201ENST00000452297 462 ntBASIC6.16□□□□□ -1.42
SNX9Q9Y5X1 OR7E157P-201ENST00000494376 911 ntBASIC6.16□□□□□ -1.42
SNX9Q9Y5X1 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.16□□□□□ -1.42
SNX9Q9Y5X1 snoU109.5-201ENST00000516231 132 ntBASIC6.16□□□□□ -1.42
SNX9Q9Y5X1 SNORA43.3-201ENST00000517240 103 ntBASIC6.16□□□□□ -1.42
SNX9Q9Y5X1 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
SNX9Q9Y5X1 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.16□□□□□ -1.42
SNX9Q9Y5X1 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC6.16□□□□□ -1.42
SNX9Q9Y5X1 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC6.16□□□□□ -1.42
SNX9Q9Y5X1 AC006115.2-201ENST00000596823 202 ntBASIC6.16□□□□□ -1.42
SNX9Q9Y5X1 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC6.16□□□□□ -1.42
SNX9Q9Y5X1 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC6.16□□□□□ -1.42
SNX9Q9Y5X1 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.16□□□□□ -1.42
SNX9Q9Y5X1 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
SNX9Q9Y5X1 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.16□□□□□ -1.42
SNX9Q9Y5X1 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SNX9Q9Y5X1 AC087516.1-201ENST00000561236 2428 ntBASIC6.16□□□□□ -1.42
SNX9Q9Y5X1 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
SNX9Q9Y5X1 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
SNX9Q9Y5X1 MRE11P1-201ENST00000464884 2127 ntBASIC6.16□□□□□ -1.42
SNX9Q9Y5X1 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SNX9Q9Y5X1 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
SNX9Q9Y5X1 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.15□□□□□ -1.42
SNX9Q9Y5X1 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SNX9Q9Y5X1 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC6.15□□□□□ -1.42
SNX9Q9Y5X1 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SNX9Q9Y5X1 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SNX9Q9Y5X1 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SNX9Q9Y5X1 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SNX9Q9Y5X1 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.42
SNX9Q9Y5X1 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SNX9Q9Y5X1 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SNX9Q9Y5X1 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.42
SNX9Q9Y5X1 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
SNX9Q9Y5X1 RN7SKP81-201ENST00000365603 331 ntBASIC6.15□□□□□ -1.42
SNX9Q9Y5X1 GNG5P2-201ENST00000372054 207 ntBASIC6.15□□□□□ -1.42
SNX9Q9Y5X1 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
SNX9Q9Y5X1 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
SNX9Q9Y5X1 MTND3P20-201ENST00000407663 186 ntBASIC6.15□□□□□ -1.42
SNX9Q9Y5X1 RNA5SP178-201ENST00000410380 128 ntBASIC6.15□□□□□ -1.42
SNX9Q9Y5X1 OR2AT2P-201ENST00000413438 905 ntBASIC6.15□□□□□ -1.42
SNX9Q9Y5X1 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.15□□□□□ -1.42
SNX9Q9Y5X1 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC6.15□□□□□ -1.42
SNX9Q9Y5X1 NAP1L4P2-201ENST00000425958 899 ntBASIC6.15□□□□□ -1.42
SNX9Q9Y5X1 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.15□□□□□ -1.42
SNX9Q9Y5X1 USP24P1-201ENST00000433802 779 ntBASIC6.15□□□□□ -1.42
SNX9Q9Y5X1 AC073410.1-201ENST00000435125 589 ntBASIC6.15□□□□□ -1.42
SNX9Q9Y5X1 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC6.15□□□□□ -1.42
SNX9Q9Y5X1 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SNX9Q9Y5X1 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC6.15□□□□□ -1.42
SNX9Q9Y5X1 YWHAEP1-201ENST00000453697 763 ntBASIC6.15□□□□□ -1.42
SNX9Q9Y5X1 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC6.15□□□□□ -1.42
SNX9Q9Y5X1 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC6.15□□□□□ -1.42
SNX9Q9Y5X1 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.15□□□□□ -1.42
SNX9Q9Y5X1 AC108751.3-201ENST00000461814 1020 ntBASIC6.15□□□□□ -1.42
SNX9Q9Y5X1 RN7SL273P-201ENST00000481561 299 ntBASIC6.15□□□□□ -1.42
SNX9Q9Y5X1 OR52A4P-202ENST00000481634 799 ntBASIC6.15□□□□□ -1.42
SNX9Q9Y5X1 RN7SL570P-201ENST00000484405 292 ntBASIC6.15□□□□□ -1.42
SNX9Q9Y5X1 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.15□□□□□ -1.42
SNX9Q9Y5X1 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC6.15□□□□□ -1.42
SNX9Q9Y5X1 AC138409.2-202ENST00000507274 458 ntBASIC6.15□□□□□ -1.42
SNX9Q9Y5X1 AC074255.1-201ENST00000511259 501 ntBASIC6.15□□□□□ -1.42
SNX9Q9Y5X1 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.15□□□□□ -1.42
SNX9Q9Y5X1 SNORA70.11-201ENST00000515987 138 ntBASIC6.15□□□□□ -1.42
SNX9Q9Y5X1 RNU6-615P-201ENST00000516065 106 ntBASIC6.15□□□□□ -1.42
SNX9Q9Y5X1 SNORA70.13-201ENST00000516116 138 ntBASIC6.15□□□□□ -1.42
SNX9Q9Y5X1 AC027544.3-201ENST00000535082 757 ntBASIC6.15□□□□□ -1.42
SNX9Q9Y5X1 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC6.15□□□□□ -1.42
SNX9Q9Y5X1 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC6.15□□□□□ -1.42
SNX9Q9Y5X1 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.15□□□□□ -1.42
SNX9Q9Y5X1 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.15□□□□□ -1.42
SNX9Q9Y5X1 AC010547.6-201ENST00000571789 193 ntBASIC6.15□□□□□ -1.42
SNX9Q9Y5X1 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC6.15□□□□□ -1.42
SNX9Q9Y5X1 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC6.15□□□□□ -1.42
SNX9Q9Y5X1 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC6.15□□□□□ -1.42
SNX9Q9Y5X1 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC6.15□□□□□ -1.42
SNX9Q9Y5X1 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SNX9Q9Y5X1 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC6.15□□□□□ -1.42
SNX9Q9Y5X1 AC239803.2-201ENST00000610161 430 ntBASIC6.15□□□□□ -1.42
SNX9Q9Y5X1 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.15□□□□□ -1.43
SNX9Q9Y5X1 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.43
SNX9Q9Y5X1 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
SNX9Q9Y5X1 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
SNX9Q9Y5X1 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SNX9Q9Y5X1 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.14□□□□□ -1.43
SNX9Q9Y5X1 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SNX9Q9Y5X1 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SNX9Q9Y5X1 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.14□□□□□ -1.43
SNX9Q9Y5X1 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SNX9Q9Y5X1 AL442128.2-201ENST00000620246 1824 ntBASIC6.14□□□□□ -1.43
SNX9Q9Y5X1 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms