Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AC093716.1-201ENST00000435923 377 ntBASIC5.7□□□□□ -1.5
BRF2Q9HAW0 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
BRF2Q9HAW0 AC023141.3-201ENST00000436698 278 ntBASIC5.7□□□□□ -1.5
BRF2Q9HAW0 PA2G4P6-201ENST00000438325 1197 ntBASIC5.7□□□□□ -1.5
BRF2Q9HAW0 AL663074.2-201ENST00000440621 479 ntBASIC5.7□□□□□ -1.5
BRF2Q9HAW0 AL513321.1-201ENST00000441175 761 ntBASIC5.7□□□□□ -1.5
BRF2Q9HAW0 RPSAP40-201ENST00000442343 891 ntBASIC5.7□□□□□ -1.5
BRF2Q9HAW0 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.7□□□□□ -1.5
BRF2Q9HAW0 AC097463.1-201ENST00000447288 481 ntBASIC5.7□□□□□ -1.5
BRF2Q9HAW0 AL157827.1-201ENST00000447622 132 ntBASIC5.7□□□□□ -1.5
BRF2Q9HAW0 AL445466.1-201ENST00000448432 357 ntBASIC5.7□□□□□ -1.5
BRF2Q9HAW0 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
BRF2Q9HAW0 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.7□□□□□ -1.5
BRF2Q9HAW0 AC012123.2-201ENST00000485809 248 ntBASIC5.7□□□□□ -1.5
BRF2Q9HAW0 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
BRF2Q9HAW0 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
BRF2Q9HAW0 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.7□□□□□ -1.5
BRF2Q9HAW0 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC5.7□□□□□ -1.5
BRF2Q9HAW0 AP003049.1-201ENST00000529418 457 ntBASIC5.7□□□□□ -1.5
BRF2Q9HAW0 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.7□□□□□ -1.5
BRF2Q9HAW0 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.7□□□□□ -1.5
BRF2Q9HAW0 AC007346.1-201ENST00000569208 867 ntBASIC5.7□□□□□ -1.5
BRF2Q9HAW0 MIR4420-201ENST00000583944 77 ntBASIC5.7□□□□□ -1.5
BRF2Q9HAW0 AC068020.1-201ENST00000594215 661 ntBASIC5.7□□□□□ -1.5
BRF2Q9HAW0 AC130352.1-201ENST00000602979 661 ntBASIC5.7□□□□□ -1.5
BRF2Q9HAW0 MTCO3P22-201ENST00000603219 784 ntBASIC5.7□□□□□ -1.5
BRF2Q9HAW0 KATNBL1P5-201ENST00000605015 517 ntBASIC5.7□□□□□ -1.5
BRF2Q9HAW0 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC5.7□□□□□ -1.5
BRF2Q9HAW0 AL352984.2-202ENST00000613699 155 ntBASIC5.7□□□□□ -1.5
BRF2Q9HAW0 AC025016.1-201ENST00000616746 682 ntBASIC5.7□□□□□ -1.5
BRF2Q9HAW0 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC5.7□□□□□ -1.5
BRF2Q9HAW0 AC021422.1-201ENST00000621212 473 ntBASIC5.7□□□□□ -1.5
BRF2Q9HAW0 RPL23AP61-201ENST00000623642 466 ntBASIC5.7□□□□□ -1.5
BRF2Q9HAW0 AC073869.7-201ENST00000640874 297 ntBASIC5.7□□□□□ -1.5
BRF2Q9HAW0 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
BRF2Q9HAW0 AL158152.1-201ENST00000602652 1435 ntBASIC5.7□□□□□ -1.5
BRF2Q9HAW0 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
BRF2Q9HAW0 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
BRF2Q9HAW0 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
BRF2Q9HAW0 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
BRF2Q9HAW0 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
BRF2Q9HAW0 KYNUP3-201ENST00000574386 1341 ntBASIC5.7□□□□□ -1.5
BRF2Q9HAW0 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.7□□□□□ -1.5
BRF2Q9HAW0 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
BRF2Q9HAW0 HSPD1P9-201ENST00000420325 1636 ntBASIC5.7□□□□□ -1.5
BRF2Q9HAW0 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.7□□□□□ -1.5
BRF2Q9HAW0 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.7□□□□□ -1.5
BRF2Q9HAW0 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.7□□□□□ -1.5
BRF2Q9HAW0 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
BRF2Q9HAW0 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
BRF2Q9HAW0 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.69□□□□□ -1.5
BRF2Q9HAW0 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
BRF2Q9HAW0 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.69□□□□□ -1.5
BRF2Q9HAW0 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
BRF2Q9HAW0 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
BRF2Q9HAW0 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
BRF2Q9HAW0 AC020656.2-201ENST00000613291 5309 ntBASIC5.69□□□□□ -1.5
BRF2Q9HAW0 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
BRF2Q9HAW0 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
BRF2Q9HAW0 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC5.69□□□□□ -1.5
BRF2Q9HAW0 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
BRF2Q9HAW0 MT-RNR2-201ENST00000387347 1559 ntBASIC5.69□□□□□ -1.5
BRF2Q9HAW0 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
BRF2Q9HAW0 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
BRF2Q9HAW0 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
BRF2Q9HAW0 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
BRF2Q9HAW0 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
BRF2Q9HAW0 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
BRF2Q9HAW0 RN7SKP86-201ENST00000410454 332 ntBASIC5.69□□□□□ -1.5
BRF2Q9HAW0 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.69□□□□□ -1.5
BRF2Q9HAW0 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.69□□□□□ -1.5
BRF2Q9HAW0 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.69□□□□□ -1.5
BRF2Q9HAW0 AC096775.1-201ENST00000437724 448 ntBASIC5.69□□□□□ -1.5
BRF2Q9HAW0 XKRY2-201ENST00000442362 1093 ntBASIC5.69□□□□□ -1.5
BRF2Q9HAW0 AL353898.1-201ENST00000444055 238 ntBASIC5.69□□□□□ -1.5
BRF2Q9HAW0 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC5.69□□□□□ -1.5
BRF2Q9HAW0 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC5.69□□□□□ -1.5
BRF2Q9HAW0 RSU1P1-201ENST00000453416 441 ntBASIC5.69□□□□□ -1.5
BRF2Q9HAW0 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.69□□□□□ -1.5
BRF2Q9HAW0 RPL38P3-201ENST00000484463 213 ntBASIC5.69□□□□□ -1.5
BRF2Q9HAW0 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.69□□□□□ -1.5
BRF2Q9HAW0 AC008629.2-201ENST00000503783 483 ntBASIC5.69□□□□□ -1.5
BRF2Q9HAW0 AC091874.2-201ENST00000505889 720 ntBASIC5.69□□□□□ -1.5
BRF2Q9HAW0 AC112484.3-201ENST00000505910 329 ntBASIC5.69□□□□□ -1.5
BRF2Q9HAW0 IGHV3-63-201ENST00000518422 341 ntBASIC5.69□□□□□ -1.5
BRF2Q9HAW0 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.69□□□□□ -1.5
BRF2Q9HAW0 BCAS2P1-201ENST00000528022 632 ntBASIC5.69□□□□□ -1.5
BRF2Q9HAW0 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.69□□□□□ -1.5
BRF2Q9HAW0 AC090424.1-201ENST00000535243 736 ntBASIC5.69□□□□□ -1.5
BRF2Q9HAW0 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC5.69□□□□□ -1.5
BRF2Q9HAW0 HNRNPCP1-201ENST00000556181 766 ntBASIC5.69□□□□□ -1.5
BRF2Q9HAW0 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.69□□□□□ -1.5
BRF2Q9HAW0 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.69□□□□□ -1.5
BRF2Q9HAW0 AC005242.1-201ENST00000585658 438 ntBASIC5.69□□□□□ -1.5
BRF2Q9HAW0 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
BRF2Q9HAW0 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.69□□□□□ -1.5
BRF2Q9HAW0 AC068768.2-201ENST00000602352 343 ntBASIC5.69□□□□□ -1.5
BRF2Q9HAW0 AC098483.2-201ENST00000603158 454 ntBASIC5.69□□□□□ -1.5
BRF2Q9HAW0 AC093388.1-201ENST00000609166 430 ntBASIC5.69□□□□□ -1.5
BRF2Q9HAW0 AC006213.4-201ENST00000616184 634 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms