Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 MIR4312-201ENST00000579909 76 ntBASIC5.79□□□□□ -1.48
SSBP3Q9BWW4 RN7SL622P-201ENST00000585292 275 ntBASIC5.79□□□□□ -1.48
SSBP3Q9BWW4 BNIP3P33-201ENST00000598912 569 ntBASIC5.79□□□□□ -1.48
SSBP3Q9BWW4 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC5.79□□□□□ -1.48
SSBP3Q9BWW4 AC009237.13-201ENST00000603193 276 ntBASIC5.79□□□□□ -1.48
SSBP3Q9BWW4 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC5.79□□□□□ -1.48
SSBP3Q9BWW4 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC5.79□□□□□ -1.48
SSBP3Q9BWW4 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.79□□□□□ -1.48
SSBP3Q9BWW4 5S_rRNA.23-201ENST00000612086 102 ntBASIC5.79□□□□□ -1.48
SSBP3Q9BWW4 Z99129.1-201ENST00000612510 255 ntBASIC5.79□□□□□ -1.48
SSBP3Q9BWW4 AC010678.1-201ENST00000614118 713 ntBASIC5.79□□□□□ -1.48
SSBP3Q9BWW4 AP005212.3-201ENST00000619964 528 ntBASIC5.79□□□□□ -1.48
SSBP3Q9BWW4 AC106782.7-201ENST00000624024 418 ntBASIC5.79□□□□□ -1.48
SSBP3Q9BWW4 AC133555.5-201ENST00000624430 418 ntBASIC5.79□□□□□ -1.48
SSBP3Q9BWW4 AC135068.11-201ENST00000636378 921 ntBASIC5.79□□□□□ -1.48
SSBP3Q9BWW4 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC5.79□□□□□ -1.48
SSBP3Q9BWW4 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SSBP3Q9BWW4 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SSBP3Q9BWW4 DDX43P1-201ENST00000510713 1763 ntBASIC5.79□□□□□ -1.48
SSBP3Q9BWW4 AC010168.2-201ENST00000562691 5428 ntBASIC5.79□□□□□ -1.48
SSBP3Q9BWW4 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC5.79□□□□□ -1.48
SSBP3Q9BWW4 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
SSBP3Q9BWW4 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC5.79□□□□□ -1.48
SSBP3Q9BWW4 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
SSBP3Q9BWW4 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
SSBP3Q9BWW4 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC5.79□□□□□ -1.48
SSBP3Q9BWW4 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SSBP3Q9BWW4 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
SSBP3Q9BWW4 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC5.79□□□□□ -1.48
SSBP3Q9BWW4 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
SSBP3Q9BWW4 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SSBP3Q9BWW4 YES1-203ENST00000577961 4554 ntTSL 5 BASIC5.79□□□□□ -1.48
SSBP3Q9BWW4 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 AC092821.3-202ENST00000641304 2767 ntBASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 DZANK1-203ENST00000357236 3739 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 AC005839.1-201ENST00000624148 3213 ntBASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 AC009831.5-201ENST00000624000 3189 ntBASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 AC127070.3-201ENST00000503695 3263 ntBASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 Y_RNA.359-201ENST00000365498 102 ntBASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 RNU6-1011P-201ENST00000384668 107 ntBASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 OOSP1-201ENST00000398992 1270 ntBASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 RN7SKP148-201ENST00000410179 275 ntBASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 IPPKP1-201ENST00000422501 768 ntBASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 BX119321.1-201ENST00000428912 797 ntBASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 MOB1AP1-201ENST00000430903 535 ntBASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 BX119917.1-201ENST00000432517 502 ntBASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 AC007563.3-201ENST00000433233 371 ntBASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 LSM3P3-201ENST00000436601 306 ntBASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 AC241584.1-201ENST00000438469 1241 ntBASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 ELOCP10-201ENST00000440624 327 ntBASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 SNRPEP8-201ENST00000442866 260 ntBASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 AL020997.1-201ENST00000446554 349 ntBASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 IGBP1P3-201ENST00000447449 1000 ntBASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 OR51P1P-201ENST00000447547 942 ntBASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 AL627224.1-201ENST00000448334 444 ntBASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 LECT2-203ENST00000512872 762 ntTSL 5 BASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 RNU6-943P-201ENST00000516960 98 ntBASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 SEPT10P1-201ENST00000517342 1162 ntBASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 AP005902.2-201ENST00000518393 307 ntBASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 AC131935.1-201ENST00000524621 333 ntBASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.78□□□□□ -1.48
SSBP3Q9BWW4 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 124.4 ms