Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
HMGCS1Q01581 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HMGCS1Q01581 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HMGCS1Q01581 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HMGCS1Q01581 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.37□□□□□ -1.55
HMGCS1Q01581 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.37□□□□□ -1.55
HMGCS1Q01581 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HMGCS1Q01581 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
HMGCS1Q01581 LYPLA1P3-201ENST00000402650 695 ntBASIC5.37□□□□□ -1.55
HMGCS1Q01581 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.37□□□□□ -1.55
HMGCS1Q01581 SLC20A1P1-201ENST00000413906 956 ntBASIC5.37□□□□□ -1.55
HMGCS1Q01581 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.37□□□□□ -1.55
HMGCS1Q01581 AL354766.1-201ENST00000423396 542 ntBASIC5.37□□□□□ -1.55
HMGCS1Q01581 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
HMGCS1Q01581 AC127526.2-201ENST00000426436 775 ntBASIC5.37□□□□□ -1.55
HMGCS1Q01581 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.37□□□□□ -1.55
HMGCS1Q01581 NPM1P18-201ENST00000434232 732 ntBASIC5.37□□□□□ -1.55
HMGCS1Q01581 NDUFB4P8-201ENST00000435351 367 ntBASIC5.37□□□□□ -1.55
HMGCS1Q01581 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.37□□□□□ -1.55
HMGCS1Q01581 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.37□□□□□ -1.55
HMGCS1Q01581 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.37□□□□□ -1.55
HMGCS1Q01581 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.37□□□□□ -1.55
HMGCS1Q01581 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.37□□□□□ -1.55
HMGCS1Q01581 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.37□□□□□ -1.55
HMGCS1Q01581 TRIM51DP-201ENST00000529746 596 ntBASIC5.37□□□□□ -1.55
HMGCS1Q01581 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.37□□□□□ -1.55
HMGCS1Q01581 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.37□□□□□ -1.55
HMGCS1Q01581 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.37□□□□□ -1.55
HMGCS1Q01581 DPPA2P4-201ENST00000563717 878 ntBASIC5.37□□□□□ -1.55
HMGCS1Q01581 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.37□□□□□ -1.55
HMGCS1Q01581 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.37□□□□□ -1.55
HMGCS1Q01581 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.37□□□□□ -1.55
HMGCS1Q01581 AC125494.2-201ENST00000602431 657 ntBASIC5.37□□□□□ -1.55
HMGCS1Q01581 AL139124.1-201ENST00000609123 421 ntBASIC5.37□□□□□ -1.55
HMGCS1Q01581 MIR6861-201ENST00000618657 64 ntBASIC5.37□□□□□ -1.55
HMGCS1Q01581 AC021766.1-201ENST00000624404 741 ntBASIC5.37□□□□□ -1.55
HMGCS1Q01581 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.37□□□□□ -1.55
HMGCS1Q01581 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.37□□□□□ -1.55
HMGCS1Q01581 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.37□□□□□ -1.55
HMGCS1Q01581 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HMGCS1Q01581 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HMGCS1Q01581 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
HMGCS1Q01581 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HMGCS1Q01581 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HMGCS1Q01581 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.37□□□□□ -1.55
HMGCS1Q01581 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
HMGCS1Q01581 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HMGCS1Q01581 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HMGCS1Q01581 BRAFP1-201ENST00000445336 2703 ntBASIC5.37□□□□□ -1.55
HMGCS1Q01581 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HMGCS1Q01581 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HMGCS1Q01581 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HMGCS1Q01581 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HMGCS1Q01581 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.37□□□□□ -1.55
HMGCS1Q01581 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.36□□□□□ -1.55
HMGCS1Q01581 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.36□□□□□ -1.55
HMGCS1Q01581 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HMGCS1Q01581 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HMGCS1Q01581 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
HMGCS1Q01581 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HMGCS1Q01581 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.36□□□□□ -1.55
HMGCS1Q01581 AC092681.1-201ENST00000297369 291 ntBASIC5.36□□□□□ -1.55
HMGCS1Q01581 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
HMGCS1Q01581 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
HMGCS1Q01581 RMRPP5-201ENST00000411156 267 ntBASIC5.36□□□□□ -1.55
HMGCS1Q01581 AC245060.4-201ENST00000413293 1121 ntBASIC5.36□□□□□ -1.55
HMGCS1Q01581 VN1R3-201ENST00000418822 919 ntBASIC5.36□□□□□ -1.55
HMGCS1Q01581 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.36□□□□□ -1.55
HMGCS1Q01581 AL022331.1-201ENST00000429025 477 ntBASIC5.36□□□□□ -1.55
HMGCS1Q01581 AC006335.2-201ENST00000437993 330 ntBASIC5.36□□□□□ -1.55
HMGCS1Q01581 AZGP1P2-201ENST00000454506 345 ntBASIC5.36□□□□□ -1.55
HMGCS1Q01581 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.36□□□□□ -1.55
HMGCS1Q01581 AC011476.1-201ENST00000466725 307 ntBASIC5.36□□□□□ -1.55
HMGCS1Q01581 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.36□□□□□ -1.55
HMGCS1Q01581 RPSAP51-201ENST00000497462 645 ntBASIC5.36□□□□□ -1.55
HMGCS1Q01581 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.36□□□□□ -1.55
HMGCS1Q01581 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC5.36□□□□□ -1.55
HMGCS1Q01581 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.36□□□□□ -1.55
HMGCS1Q01581 HMGB1P42-201ENST00000532126 553 ntBASIC5.36□□□□□ -1.55
HMGCS1Q01581 AP004609.2-201ENST00000532177 190 ntBASIC5.36□□□□□ -1.55
HMGCS1Q01581 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.36□□□□□ -1.55
HMGCS1Q01581 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.36□□□□□ -1.55
HMGCS1Q01581 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.36□□□□□ -1.55
HMGCS1Q01581 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.36□□□□□ -1.55
HMGCS1Q01581 AL589935.2-201ENST00000616471 1231 ntBASIC5.36□□□□□ -1.55
HMGCS1Q01581 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HMGCS1Q01581 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
HMGCS1Q01581 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC5.36□□□□□ -1.55
HMGCS1Q01581 AC079097.1-201ENST00000512187 1399 ntBASIC5.36□□□□□ -1.55
HMGCS1Q01581 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
HMGCS1Q01581 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.36□□□□□ -1.55
HMGCS1Q01581 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HMGCS1Q01581 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.36□□□□□ -1.55
HMGCS1Q01581 AC083837.1-201ENST00000565297 2994 ntBASIC5.36□□□□□ -1.55
HMGCS1Q01581 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HMGCS1Q01581 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.35□□□□□ -1.55
HMGCS1Q01581 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
HMGCS1Q01581 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HMGCS1Q01581 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HMGCS1Q01581 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 198.6 ms