Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.79□□□□□ -1.48
CDH4P55283 AL133173.1-201ENST00000423458 397 ntBASIC5.79□□□□□ -1.48
CDH4P55283 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.79□□□□□ -1.48
CDH4P55283 AC006335.2-201ENST00000437993 330 ntBASIC5.79□□□□□ -1.48
CDH4P55283 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.79□□□□□ -1.48
CDH4P55283 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CDH4P55283 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.79□□□□□ -1.48
CDH4P55283 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.79□□□□□ -1.48
CDH4P55283 RPSAP39-201ENST00000467439 883 ntBASIC5.79□□□□□ -1.48
CDH4P55283 AC093719.1-201ENST00000480427 441 ntBASIC5.79□□□□□ -1.48
CDH4P55283 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.79□□□□□ -1.48
CDH4P55283 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.79□□□□□ -1.48
CDH4P55283 AC021146.10-201ENST00000515628 706 ntBASIC5.79□□□□□ -1.48
CDH4P55283 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.79□□□□□ -1.48
CDH4P55283 IGLV3-24-201ENST00000517477 197 ntBASIC5.79□□□□□ -1.48
CDH4P55283 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.79□□□□□ -1.48
CDH4P55283 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.79□□□□□ -1.48
CDH4P55283 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.79□□□□□ -1.48
CDH4P55283 RBM22P12-201ENST00000567098 1255 ntBASIC5.79□□□□□ -1.48
CDH4P55283 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.79□□□□□ -1.48
CDH4P55283 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.79□□□□□ -1.48
CDH4P55283 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.79□□□□□ -1.48
CDH4P55283 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.79□□□□□ -1.48
CDH4P55283 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.79□□□□□ -1.48
CDH4P55283 AC104695.2-201ENST00000605056 775 ntBASIC5.79□□□□□ -1.48
CDH4P55283 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CDH4P55283 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC5.79□□□□□ -1.48
CDH4P55283 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CDH4P55283 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
CDH4P55283 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.79□□□□□ -1.48
CDH4P55283 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDH4P55283 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDH4P55283 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CDH4P55283 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CDH4P55283 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
CDH4P55283 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CDH4P55283 KYNUP3-201ENST00000574386 1341 ntBASIC5.78□□□□□ -1.48
CDH4P55283 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDH4P55283 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CDH4P55283 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDH4P55283 RNA5SP242-201ENST00000364171 118 ntBASIC5.78□□□□□ -1.48
CDH4P55283 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.78□□□□□ -1.48
CDH4P55283 AL050305.1-201ENST00000399993 1230 ntBASIC5.78□□□□□ -1.48
CDH4P55283 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.78□□□□□ -1.48
CDH4P55283 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.78□□□□□ -1.48
CDH4P55283 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.78□□□□□ -1.48
CDH4P55283 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.78□□□□□ -1.48
CDH4P55283 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC5.78□□□□□ -1.48
CDH4P55283 RPL34P27-201ENST00000428810 349 ntBASIC5.78□□□□□ -1.48
CDH4P55283 TMEM183AP1-205ENST00000432739 290 ntBASIC5.78□□□□□ -1.48
CDH4P55283 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.78□□□□□ -1.48
CDH4P55283 AL450023.1-201ENST00000450868 751 ntBASIC5.78□□□□□ -1.48
CDH4P55283 AP000547.1-201ENST00000454360 617 ntBASIC5.78□□□□□ -1.48
CDH4P55283 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CDH4P55283 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CDH4P55283 AC135999.1-201ENST00000478962 479 ntBASIC5.78□□□□□ -1.48
CDH4P55283 AC106872.4-201ENST00000510050 523 ntBASIC5.78□□□□□ -1.48
CDH4P55283 NPM1P21-201ENST00000513394 762 ntBASIC5.78□□□□□ -1.48
CDH4P55283 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.78□□□□□ -1.48
CDH4P55283 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.78□□□□□ -1.48
CDH4P55283 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.78□□□□□ -1.48
CDH4P55283 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.78□□□□□ -1.48
CDH4P55283 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.78□□□□□ -1.48
CDH4P55283 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.78□□□□□ -1.48
CDH4P55283 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.78□□□□□ -1.48
CDH4P55283 MRPS21P7-201ENST00000566937 238 ntBASIC5.78□□□□□ -1.48
CDH4P55283 SNORD95-201ENST00000579879 68 ntBASIC5.78□□□□□ -1.48
CDH4P55283 MIR1273E-201ENST00000581165 102 ntBASIC5.78□□□□□ -1.48
CDH4P55283 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.78□□□□□ -1.48
CDH4P55283 AC004477.3-201ENST00000614061 590 ntBASIC5.78□□□□□ -1.48
CDH4P55283 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.78□□□□□ -1.48
CDH4P55283 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
CDH4P55283 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.78□□□□□ -1.48
CDH4P55283 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CDH4P55283 AP001284.1-201ENST00000528393 2118 ntBASIC5.78□□□□□ -1.48
CDH4P55283 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CDH4P55283 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CDH4P55283 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CDH4P55283 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDH4P55283 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.78□□□□□ -1.48
CDH4P55283 AC027279.4-201ENST00000624371 2072 ntBASIC5.78□□□□□ -1.48
CDH4P55283 AL137058.3-201ENST00000624531 3099 ntBASIC5.78□□□□□ -1.48
CDH4P55283 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CDH4P55283 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.78□□□□□ -1.48
CDH4P55283 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
CDH4P55283 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
CDH4P55283 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CDH4P55283 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.77□□□□□ -1.49
CDH4P55283 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CDH4P55283 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CDH4P55283 UGT2B24P-201ENST00000514441 1597 ntBASIC5.77□□□□□ -1.49
CDH4P55283 GAPDHP24-201ENST00000328713 983 ntBASIC5.77□□□□□ -1.49
CDH4P55283 MIR143-201ENST00000385300 106 ntBASIC5.77□□□□□ -1.49
CDH4P55283 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
CDH4P55283 NPM1P37-201ENST00000403105 874 ntBASIC5.77□□□□□ -1.49
CDH4P55283 AL590399.2-201ENST00000427536 309 ntBASIC5.77□□□□□ -1.49
CDH4P55283 PPIAP20-201ENST00000449839 135 ntBASIC5.77□□□□□ -1.49
CDH4P55283 AC114982.2-201ENST00000461396 358 ntBASIC5.77□□□□□ -1.49
CDH4P55283 AL136038.1-201ENST00000497246 351 ntBASIC5.77□□□□□ -1.49
CDH4P55283 RN7SL466P-201ENST00000497546 295 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms