Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
PCDH9Q9HC56 GTF2IP4-201ENST00000453092 2054 ntBASIC5.93□□□□□ -1.46
PCDH9Q9HC56 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PCDH9Q9HC56 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PCDH9Q9HC56 UGT2B24P-201ENST00000514441 1597 ntBASIC5.93□□□□□ -1.46
PCDH9Q9HC56 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PCDH9Q9HC56 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PCDH9Q9HC56 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PCDH9Q9HC56 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PCDH9Q9HC56 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.92□□□□□ -1.46
PCDH9Q9HC56 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PCDH9Q9HC56 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
PCDH9Q9HC56 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PCDH9Q9HC56 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PCDH9Q9HC56 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
PCDH9Q9HC56 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PCDH9Q9HC56 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.92□□□□□ -1.46
PCDH9Q9HC56 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
PCDH9Q9HC56 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.92□□□□□ -1.46
PCDH9Q9HC56 RN7SKP186-201ENST00000365371 303 ntBASIC5.92□□□□□ -1.46
PCDH9Q9HC56 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.92□□□□□ -1.46
PCDH9Q9HC56 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.92□□□□□ -1.46
PCDH9Q9HC56 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
PCDH9Q9HC56 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PCDH9Q9HC56 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PCDH9Q9HC56 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.92□□□□□ -1.46
PCDH9Q9HC56 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC5.92□□□□□ -1.46
PCDH9Q9HC56 DNAJA1P5-201ENST00000440278 943 ntBASIC5.92□□□□□ -1.46
PCDH9Q9HC56 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PCDH9Q9HC56 MED28P3-201ENST00000444288 531 ntBASIC5.92□□□□□ -1.46
PCDH9Q9HC56 HMGN1P2-201ENST00000445197 310 ntBASIC5.92□□□□□ -1.46
PCDH9Q9HC56 AC023271.1-201ENST00000445936 1090 ntBASIC5.92□□□□□ -1.46
PCDH9Q9HC56 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.92□□□□□ -1.46
PCDH9Q9HC56 AL513343.1-201ENST00000451818 792 ntBASIC5.92□□□□□ -1.46
PCDH9Q9HC56 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PCDH9Q9HC56 RN7SL197P-201ENST00000466981 299 ntBASIC5.92□□□□□ -1.46
PCDH9Q9HC56 AC099521.1-201ENST00000482557 334 ntBASIC5.92□□□□□ -1.46
PCDH9Q9HC56 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.92□□□□□ -1.46
PCDH9Q9HC56 MORF4L2P1-201ENST00000503761 858 ntBASIC5.92□□□□□ -1.46
PCDH9Q9HC56 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.92□□□□□ -1.46
PCDH9Q9HC56 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.92□□□□□ -1.46
PCDH9Q9HC56 HNRNPRP2-201ENST00000528421 743 ntBASIC5.92□□□□□ -1.46
PCDH9Q9HC56 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PCDH9Q9HC56 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.92□□□□□ -1.46
PCDH9Q9HC56 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.92□□□□□ -1.46
PCDH9Q9HC56 AC068305.2-201ENST00000550567 1205 ntBASIC5.92□□□□□ -1.46
PCDH9Q9HC56 AL356801.1-201ENST00000559320 294 ntBASIC5.92□□□□□ -1.46
PCDH9Q9HC56 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.92□□□□□ -1.46
PCDH9Q9HC56 AC245128.3-201ENST00000594721 748 ntBASIC5.92□□□□□ -1.46
PCDH9Q9HC56 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.92□□□□□ -1.46
PCDH9Q9HC56 FO681491.1-202ENST00000623392 737 ntBASIC5.92□□□□□ -1.46
PCDH9Q9HC56 AP000720.1-201ENST00000625091 483 ntBASIC5.92□□□□□ -1.46
PCDH9Q9HC56 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.92□□□□□ -1.46
PCDH9Q9HC56 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
PCDH9Q9HC56 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PCDH9Q9HC56 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.92□□□□□ -1.46
PCDH9Q9HC56 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
PCDH9Q9HC56 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.92□□□□□ -1.46
PCDH9Q9HC56 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.92□□□□□ -1.46
PCDH9Q9HC56 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
PCDH9Q9HC56 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.92□□□□□ -1.46
PCDH9Q9HC56 PDZK1P1-202ENST00000425209 1350 ntBASIC5.92□□□□□ -1.46
PCDH9Q9HC56 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.92□□□□□ -1.46
PCDH9Q9HC56 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PCDH9Q9HC56 AC123769.1-201ENST00000530992 3192 ntBASIC5.92□□□□□ -1.46
PCDH9Q9HC56 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
PCDH9Q9HC56 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PCDH9Q9HC56 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PCDH9Q9HC56 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
PCDH9Q9HC56 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
PCDH9Q9HC56 AL592429.1-201ENST00000403909 1473 ntBASIC5.91□□□□□ -1.46
PCDH9Q9HC56 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
PCDH9Q9HC56 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PCDH9Q9HC56 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
PCDH9Q9HC56 MIR130A-201ENST00000385274 89 ntBASIC5.91□□□□□ -1.46
PCDH9Q9HC56 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.91□□□□□ -1.46
PCDH9Q9HC56 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.91□□□□□ -1.46
PCDH9Q9HC56 AL354766.1-201ENST00000423396 542 ntBASIC5.91□□□□□ -1.46
PCDH9Q9HC56 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.91□□□□□ -1.46
PCDH9Q9HC56 NPM1P18-201ENST00000434232 732 ntBASIC5.91□□□□□ -1.46
PCDH9Q9HC56 MTND2P40-201ENST00000436718 841 ntBASIC5.91□□□□□ -1.46
PCDH9Q9HC56 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.91□□□□□ -1.46
PCDH9Q9HC56 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.91□□□□□ -1.46
PCDH9Q9HC56 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.91□□□□□ -1.46
PCDH9Q9HC56 MTND2P3-201ENST00000452458 470 ntBASIC5.91□□□□□ -1.46
PCDH9Q9HC56 TPRKBP1-201ENST00000456243 481 ntBASIC5.91□□□□□ -1.46
PCDH9Q9HC56 SNORD125-201ENST00000459538 96 ntBASIC5.91□□□□□ -1.46
PCDH9Q9HC56 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PCDH9Q9HC56 AC012123.2-201ENST00000485809 248 ntBASIC5.91□□□□□ -1.46
PCDH9Q9HC56 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.91□□□□□ -1.46
PCDH9Q9HC56 RPS17P5-201ENST00000498293 408 ntBASIC5.91□□□□□ -1.46
PCDH9Q9HC56 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
PCDH9Q9HC56 AC114781.3-201ENST00000512083 142 ntBASIC5.91□□□□□ -1.46
PCDH9Q9HC56 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.91□□□□□ -1.46
PCDH9Q9HC56 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.91□□□□□ -1.46
PCDH9Q9HC56 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.91□□□□□ -1.46
PCDH9Q9HC56 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.91□□□□□ -1.46
PCDH9Q9HC56 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.91□□□□□ -1.46
PCDH9Q9HC56 AC137627.1-201ENST00000545761 289 ntBASIC5.91□□□□□ -1.46
PCDH9Q9HC56 AC139697.1-201ENST00000548429 745 ntBASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms