Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM49D1C9J1S8 AC104966.1-201ENST00000467010 1464 ntBASIC5.54□□□□□ -1.52
TRIM49D1C9J1S8 AC007842.1-201ENST00000597336 2039 ntBASIC5.54□□□□□ -1.52
TRIM49D1C9J1S8 AL078621.3-201ENST00000623707 2042 ntBASIC5.54□□□□□ -1.52
TRIM49D1C9J1S8 TMSB4XP2-201ENST00000335179 210 ntBASIC5.54□□□□□ -1.52
TRIM49D1C9J1S8 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.54□□□□□ -1.52
TRIM49D1C9J1S8 AC099535.1-201ENST00000408928 371 ntBASIC5.54□□□□□ -1.52
TRIM49D1C9J1S8 AL359885.1-201ENST00000415786 903 ntBASIC5.54□□□□□ -1.52
TRIM49D1C9J1S8 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.54□□□□□ -1.52
TRIM49D1C9J1S8 KATNBL1P2-201ENST00000433311 835 ntBASIC5.54□□□□□ -1.52
TRIM49D1C9J1S8 NDUFS5P5-201ENST00000437256 321 ntBASIC5.54□□□□□ -1.52
TRIM49D1C9J1S8 RPS10P18-201ENST00000442662 495 ntBASIC5.54□□□□□ -1.52
TRIM49D1C9J1S8 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.54□□□□□ -1.52
TRIM49D1C9J1S8 RN7SL583P-201ENST00000475692 287 ntBASIC5.54□□□□□ -1.52
TRIM49D1C9J1S8 RN7SL741P-201ENST00000482473 289 ntBASIC5.54□□□□□ -1.52
TRIM49D1C9J1S8 AC021006.1-201ENST00000489849 553 ntBASIC5.54□□□□□ -1.52
TRIM49D1C9J1S8 RBBP4P1-201ENST00000502424 1276 ntBASIC5.54□□□□□ -1.52
TRIM49D1C9J1S8 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.54□□□□□ -1.52
TRIM49D1C9J1S8 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.54□□□□□ -1.52
TRIM49D1C9J1S8 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.54□□□□□ -1.52
TRIM49D1C9J1S8 AC092709.1-201ENST00000521355 1045 ntBASIC5.54□□□□□ -1.52
TRIM49D1C9J1S8 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.54□□□□□ -1.52
TRIM49D1C9J1S8 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC5.54□□□□□ -1.52
TRIM49D1C9J1S8 AC008507.3-201ENST00000585753 472 ntBASIC5.54□□□□□ -1.52
TRIM49D1C9J1S8 AC010503.3-201ENST00000594355 540 ntBASIC5.54□□□□□ -1.52
TRIM49D1C9J1S8 AC002069.2-201ENST00000603580 883 ntBASIC5.54□□□□□ -1.52
TRIM49D1C9J1S8 AP001437.1-201ENST00000608783 456 ntBASIC5.54□□□□□ -1.52
TRIM49D1C9J1S8 AC063952.1-203ENST00000634410 658 ntBASIC5.54□□□□□ -1.52
TRIM49D1C9J1S8 AL596275.2-207ENST00000641188 675 ntBASIC5.54□□□□□ -1.52
TRIM49D1C9J1S8 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM49D1C9J1S8 BX284613.1-201ENST00000452221 1641 ntBASIC5.54□□□□□ -1.52
TRIM49D1C9J1S8 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM49D1C9J1S8 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
TRIM49D1C9J1S8 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.54□□□□□ -1.52
TRIM49D1C9J1S8 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
TRIM49D1C9J1S8 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.54□□□□□ -1.52
TRIM49D1C9J1S8 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM49D1C9J1S8 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.54□□□□□ -1.52
TRIM49D1C9J1S8 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.54□□□□□ -1.52
TRIM49D1C9J1S8 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.53□□□□□ -1.52
TRIM49D1C9J1S8 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
TRIM49D1C9J1S8 MAPK10-338ENST00000641647 3362 ntBASIC5.53□□□□□ -1.52
TRIM49D1C9J1S8 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.53□□□□□ -1.52
TRIM49D1C9J1S8 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
TRIM49D1C9J1S8 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM49D1C9J1S8 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM49D1C9J1S8 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.53□□□□□ -1.52
TRIM49D1C9J1S8 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM49D1C9J1S8 COX6B1P3-201ENST00000312310 260 ntBASIC5.53□□□□□ -1.52
TRIM49D1C9J1S8 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.53□□□□□ -1.52
TRIM49D1C9J1S8 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM49D1C9J1S8 RN7SKP81-201ENST00000365603 331 ntBASIC5.53□□□□□ -1.52
TRIM49D1C9J1S8 AC010740.1-201ENST00000417035 684 ntBASIC5.53□□□□□ -1.52
TRIM49D1C9J1S8 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC5.53□□□□□ -1.52
TRIM49D1C9J1S8 AK4P4-201ENST00000419465 646 ntBASIC5.53□□□□□ -1.52
TRIM49D1C9J1S8 AC007161.1-204ENST00000423039 460 ntBASIC5.53□□□□□ -1.52
TRIM49D1C9J1S8 BX323845.3-201ENST00000428215 527 ntBASIC5.53□□□□□ -1.52
TRIM49D1C9J1S8 NPM1P25-201ENST00000429734 854 ntBASIC5.53□□□□□ -1.52
TRIM49D1C9J1S8 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.53□□□□□ -1.52
TRIM49D1C9J1S8 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM49D1C9J1S8 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC5.53□□□□□ -1.52
TRIM49D1C9J1S8 AC006335.2-201ENST00000437993 330 ntBASIC5.53□□□□□ -1.52
TRIM49D1C9J1S8 IGBP1P4-201ENST00000503202 879 ntBASIC5.53□□□□□ -1.52
TRIM49D1C9J1S8 RN7SKP183-201ENST00000517169 324 ntBASIC5.53□□□□□ -1.52
TRIM49D1C9J1S8 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.53□□□□□ -1.52
TRIM49D1C9J1S8 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.53□□□□□ -1.52
TRIM49D1C9J1S8 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.53□□□□□ -1.52
TRIM49D1C9J1S8 AL359219.2-201ENST00000555184 348 ntBASIC5.53□□□□□ -1.52
TRIM49D1C9J1S8 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.53□□□□□ -1.52
TRIM49D1C9J1S8 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.53□□□□□ -1.52
TRIM49D1C9J1S8 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.53□□□□□ -1.52
TRIM49D1C9J1S8 MIR4660-201ENST00000583549 74 ntBASIC5.53□□□□□ -1.52
TRIM49D1C9J1S8 RPL12P48-201ENST00000605620 304 ntBASIC5.53□□□□□ -1.52
TRIM49D1C9J1S8 AL356608.1-201ENST00000610034 820 ntBASIC5.53□□□□□ -1.52
TRIM49D1C9J1S8 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.53□□□□□ -1.52
TRIM49D1C9J1S8 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.53□□□□□ -1.52
TRIM49D1C9J1S8 uc_338.7-201ENST00000621834 124 ntBASIC5.53□□□□□ -1.52
TRIM49D1C9J1S8 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.53□□□□□ -1.52
TRIM49D1C9J1S8 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM49D1C9J1S8 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM49D1C9J1S8 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.53□□□□□ -1.52
TRIM49D1C9J1S8 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM49D1C9J1S8 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.53□□□□□ -1.52
TRIM49D1C9J1S8 AC137056.2-201ENST00000624055 1958 ntBASIC5.53□□□□□ -1.52
TRIM49D1C9J1S8 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM49D1C9J1S8 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM49D1C9J1S8 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
TRIM49D1C9J1S8 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
TRIM49D1C9J1S8 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
TRIM49D1C9J1S8 AC063923.1-201ENST00000478982 1619 ntBASIC5.52□□□□□ -1.53
TRIM49D1C9J1S8 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
TRIM49D1C9J1S8 AC092376.2-201ENST00000622621 4116 ntBASIC5.52□□□□□ -1.53
TRIM49D1C9J1S8 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM49D1C9J1S8 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.52□□□□□ -1.53
TRIM49D1C9J1S8 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM49D1C9J1S8 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
TRIM49D1C9J1S8 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
TRIM49D1C9J1S8 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
TRIM49D1C9J1S8 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.52□□□□□ -1.53
TRIM49D1C9J1S8 RNA5SP273-201ENST00000362484 113 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 131.8 ms