Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.24□□□□□ -1.57
TRAPPC4Q9Y296 SNORA70.6-201ENST00000383934 134 ntBASIC5.24□□□□□ -1.57
TRAPPC4Q9Y296 MIR621-201ENST00000384919 96 ntBASIC5.24□□□□□ -1.57
TRAPPC4Q9Y296 MIR1203-201ENST00000408812 85 ntBASIC5.24□□□□□ -1.57
TRAPPC4Q9Y296 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.24□□□□□ -1.57
TRAPPC4Q9Y296 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.24□□□□□ -1.57
TRAPPC4Q9Y296 AC009784.1-201ENST00000426484 460 ntBASIC5.24□□□□□ -1.57
TRAPPC4Q9Y296 SUMO2P8-201ENST00000434672 286 ntBASIC5.24□□□□□ -1.57
TRAPPC4Q9Y296 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.24□□□□□ -1.57
TRAPPC4Q9Y296 RPS17P15-201ENST00000475609 349 ntBASIC5.24□□□□□ -1.57
TRAPPC4Q9Y296 AC006539.1-201ENST00000481419 501 ntBASIC5.24□□□□□ -1.57
TRAPPC4Q9Y296 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.24□□□□□ -1.57
TRAPPC4Q9Y296 AC074255.1-201ENST00000511259 501 ntBASIC5.24□□□□□ -1.57
TRAPPC4Q9Y296 GAPDHP62-201ENST00000515313 990 ntBASIC5.24□□□□□ -1.57
TRAPPC4Q9Y296 RNA5SP271-201ENST00000516700 88 ntBASIC5.24□□□□□ -1.57
TRAPPC4Q9Y296 AC020937.1-201ENST00000519677 1013 ntBASIC5.24□□□□□ -1.57
TRAPPC4Q9Y296 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.24□□□□□ -1.57
TRAPPC4Q9Y296 HMGN2P36-201ENST00000529541 409 ntBASIC5.24□□□□□ -1.57
TRAPPC4Q9Y296 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.24□□□□□ -1.57
TRAPPC4Q9Y296 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
TRAPPC4Q9Y296 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.24□□□□□ -1.57
TRAPPC4Q9Y296 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TRAPPC4Q9Y296 AL513327.3-201ENST00000602618 469 ntBASIC5.24□□□□□ -1.57
TRAPPC4Q9Y296 AC067773.1-201ENST00000603284 1094 ntBASIC5.24□□□□□ -1.57
TRAPPC4Q9Y296 AC108865.2-201ENST00000606881 432 ntBASIC5.24□□□□□ -1.57
TRAPPC4Q9Y296 MIR6071-201ENST00000616741 78 ntBASIC5.24□□□□□ -1.57
TRAPPC4Q9Y296 FO681491.1-202ENST00000623392 737 ntBASIC5.24□□□□□ -1.57
TRAPPC4Q9Y296 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.24□□□□□ -1.57
TRAPPC4Q9Y296 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.24□□□□□ -1.57
TRAPPC4Q9Y296 AC239868.2-201ENST00000564237 4527 ntBASIC5.24□□□□□ -1.57
TRAPPC4Q9Y296 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TRAPPC4Q9Y296 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
TRAPPC4Q9Y296 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TRAPPC4Q9Y296 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.24□□□□□ -1.57
TRAPPC4Q9Y296 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TRAPPC4Q9Y296 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.24□□□□□ -1.57
TRAPPC4Q9Y296 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TRAPPC4Q9Y296 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.23□□□□□ -1.57
TRAPPC4Q9Y296 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.23□□□□□ -1.57
TRAPPC4Q9Y296 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.23□□□□□ -1.57
TRAPPC4Q9Y296 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TRAPPC4Q9Y296 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TRAPPC4Q9Y296 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.23□□□□□ -1.57
TRAPPC4Q9Y296 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TRAPPC4Q9Y296 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
TRAPPC4Q9Y296 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.23□□□□□ -1.57
TRAPPC4Q9Y296 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.23□□□□□ -1.57
TRAPPC4Q9Y296 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.23□□□□□ -1.57
TRAPPC4Q9Y296 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TRAPPC4Q9Y296 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TRAPPC4Q9Y296 AC007938.2-201ENST00000604666 2634 ntBASIC5.23□□□□□ -1.57
TRAPPC4Q9Y296 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
TRAPPC4Q9Y296 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.23□□□□□ -1.57
TRAPPC4Q9Y296 RNU1-150P-201ENST00000362491 162 ntBASIC5.23□□□□□ -1.57
TRAPPC4Q9Y296 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
TRAPPC4Q9Y296 OR7E156P-201ENST00000400303 464 ntBASIC5.23□□□□□ -1.57
TRAPPC4Q9Y296 OR7E101P-201ENST00000400428 513 ntBASIC5.23□□□□□ -1.57
TRAPPC4Q9Y296 RN7SKP29-201ENST00000410957 272 ntBASIC5.23□□□□□ -1.57
TRAPPC4Q9Y296 AL354890.1-201ENST00000413730 346 ntBASIC5.23□□□□□ -1.57
TRAPPC4Q9Y296 AC017078.1-201ENST00000416146 368 ntBASIC5.23□□□□□ -1.57
TRAPPC4Q9Y296 HYALP1-201ENST00000417674 1279 ntBASIC5.23□□□□□ -1.57
TRAPPC4Q9Y296 AK4P4-201ENST00000419465 646 ntBASIC5.23□□□□□ -1.57
TRAPPC4Q9Y296 TRGV5P-201ENST00000419915 354 ntBASIC5.23□□□□□ -1.57
TRAPPC4Q9Y296 AC066692.1-201ENST00000421721 457 ntBASIC5.23□□□□□ -1.57
TRAPPC4Q9Y296 AC126120.1-201ENST00000431082 470 ntBASIC5.23□□□□□ -1.57
TRAPPC4Q9Y296 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.23□□□□□ -1.57
TRAPPC4Q9Y296 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.23□□□□□ -1.57
TRAPPC4Q9Y296 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.23□□□□□ -1.57
TRAPPC4Q9Y296 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.23□□□□□ -1.57
TRAPPC4Q9Y296 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.23□□□□□ -1.57
TRAPPC4Q9Y296 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.23□□□□□ -1.57
TRAPPC4Q9Y296 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.23□□□□□ -1.57
TRAPPC4Q9Y296 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.23□□□□□ -1.57
TRAPPC4Q9Y296 AL157777.1-201ENST00000468100 304 ntBASIC5.23□□□□□ -1.57
TRAPPC4Q9Y296 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC5.23□□□□□ -1.57
TRAPPC4Q9Y296 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.23□□□□□ -1.57
TRAPPC4Q9Y296 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.23□□□□□ -1.57
TRAPPC4Q9Y296 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.23□□□□□ -1.57
TRAPPC4Q9Y296 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.23□□□□□ -1.57
TRAPPC4Q9Y296 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.23□□□□□ -1.57
TRAPPC4Q9Y296 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.23□□□□□ -1.57
TRAPPC4Q9Y296 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.23□□□□□ -1.57
TRAPPC4Q9Y296 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
TRAPPC4Q9Y296 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.23□□□□□ -1.57
TRAPPC4Q9Y296 FAM27E4-201ENST00000605259 342 ntBASIC5.23□□□□□ -1.57
TRAPPC4Q9Y296 AC021766.1-201ENST00000624404 741 ntBASIC5.23□□□□□ -1.57
TRAPPC4Q9Y296 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.23□□□□□ -1.57
TRAPPC4Q9Y296 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TRAPPC4Q9Y296 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.23□□□□□ -1.57
TRAPPC4Q9Y296 AL132656.3-201ENST00000606384 1595 ntBASIC5.23□□□□□ -1.57
TRAPPC4Q9Y296 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TRAPPC4Q9Y296 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
TRAPPC4Q9Y296 MRRFP1-201ENST00000435941 1675 ntBASIC5.23□□□□□ -1.57
TRAPPC4Q9Y296 AC006484.1-201ENST00000435086 1884 ntBASIC5.23□□□□□ -1.57
TRAPPC4Q9Y296 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.23□□□□□ -1.57
TRAPPC4Q9Y296 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.23□□□□□ -1.57
TRAPPC4Q9Y296 AC083899.1-201ENST00000454465 3819 ntBASIC5.23□□□□□ -1.57
TRAPPC4Q9Y296 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.23□□□□□ -1.57
TRAPPC4Q9Y296 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.23□□□□□ -1.57
TRAPPC4Q9Y296 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms