Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 RN7SKP70-201ENST00000516655 271 ntBASIC5.08□□□□□ -1.6
DUX4Q9UBX2 AC130365.2-201ENST00000525882 1201 ntBASIC5.08□□□□□ -1.6
DUX4Q9UBX2 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.08□□□□□ -1.6
DUX4Q9UBX2 AC005363.1-201ENST00000530779 351 ntBASIC5.08□□□□□ -1.6
DUX4Q9UBX2 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.08□□□□□ -1.6
DUX4Q9UBX2 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.08□□□□□ -1.6
DUX4Q9UBX2 AL163952.1-202ENST00000569625 600 ntBASIC5.08□□□□□ -1.6
DUX4Q9UBX2 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.08□□□□□ -1.6
DUX4Q9UBX2 AP005262.1-201ENST00000582646 997 ntBASIC5.08□□□□□ -1.6
DUX4Q9UBX2 MIR4310-201ENST00000582950 57 ntBASIC5.08□□□□□ -1.6
DUX4Q9UBX2 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.08□□□□□ -1.6
DUX4Q9UBX2 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
DUX4Q9UBX2 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
DUX4Q9UBX2 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.08□□□□□ -1.6
DUX4Q9UBX2 AC073389.3-201ENST00000609434 935 ntBASIC5.08□□□□□ -1.6
DUX4Q9UBX2 MIR6861-201ENST00000618657 64 ntBASIC5.08□□□□□ -1.6
DUX4Q9UBX2 AC073593.1-201ENST00000624500 411 ntBASIC5.08□□□□□ -1.6
DUX4Q9UBX2 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
DUX4Q9UBX2 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.08□□□□□ -1.6
DUX4Q9UBX2 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
DUX4Q9UBX2 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
DUX4Q9UBX2 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.08□□□□□ -1.6
DUX4Q9UBX2 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
DUX4Q9UBX2 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
DUX4Q9UBX2 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
DUX4Q9UBX2 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC5.08□□□□□ -1.6
DUX4Q9UBX2 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.08□□□□□ -1.6
DUX4Q9UBX2 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.08□□□□□ -1.6
DUX4Q9UBX2 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
DUX4Q9UBX2 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
DUX4Q9UBX2 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
DUX4Q9UBX2 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
DUX4Q9UBX2 RBMY1HP-201ENST00000382759 1389 ntBASIC5.07□□□□□ -1.6
DUX4Q9UBX2 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
DUX4Q9UBX2 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.07□□□□□ -1.6
DUX4Q9UBX2 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
DUX4Q9UBX2 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
DUX4Q9UBX2 AL359091.1-201ENST00000449048 1734 ntBASIC5.07□□□□□ -1.6
DUX4Q9UBX2 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
DUX4Q9UBX2 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
DUX4Q9UBX2 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
DUX4Q9UBX2 SNORA70.6-201ENST00000383934 134 ntBASIC5.07□□□□□ -1.6
DUX4Q9UBX2 MIR323B-201ENST00000385269 82 ntBASIC5.07□□□□□ -1.6
DUX4Q9UBX2 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.07□□□□□ -1.6
DUX4Q9UBX2 GPS2P1-201ENST00000411761 986 ntBASIC5.07□□□□□ -1.6
DUX4Q9UBX2 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.07□□□□□ -1.6
DUX4Q9UBX2 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.07□□□□□ -1.6
DUX4Q9UBX2 VN1R3-201ENST00000418822 919 ntBASIC5.07□□□□□ -1.6
DUX4Q9UBX2 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.07□□□□□ -1.6
DUX4Q9UBX2 KCTD9P1-201ENST00000430462 1167 ntBASIC5.07□□□□□ -1.6
DUX4Q9UBX2 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
DUX4Q9UBX2 SEPT14P12-201ENST00000442280 560 ntBASIC5.07□□□□□ -1.6
DUX4Q9UBX2 RNU7-157P-201ENST00000459600 66 ntBASIC5.07□□□□□ -1.6
DUX4Q9UBX2 AC135999.1-201ENST00000478962 479 ntBASIC5.07□□□□□ -1.6
DUX4Q9UBX2 LDHAP1-201ENST00000509421 992 ntBASIC5.07□□□□□ -1.6
DUX4Q9UBX2 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.07□□□□□ -1.6
DUX4Q9UBX2 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.07□□□□□ -1.6
DUX4Q9UBX2 RNA5SP340-201ENST00000517132 107 ntBASIC5.07□□□□□ -1.6
DUX4Q9UBX2 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.07□□□□□ -1.6
DUX4Q9UBX2 AC026826.3-201ENST00000561747 158 ntBASIC5.07□□□□□ -1.6
DUX4Q9UBX2 AC002519.2-203ENST00000567043 837 ntBASIC5.07□□□□□ -1.6
DUX4Q9UBX2 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.07□□□□□ -1.6
DUX4Q9UBX2 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.07□□□□□ -1.6
DUX4Q9UBX2 AC134669.1-201ENST00000581275 672 ntBASIC5.07□□□□□ -1.6
DUX4Q9UBX2 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.07□□□□□ -1.6
DUX4Q9UBX2 AC008507.3-201ENST00000585753 472 ntBASIC5.07□□□□□ -1.6
DUX4Q9UBX2 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.07□□□□□ -1.6
DUX4Q9UBX2 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC5.07□□□□□ -1.6
DUX4Q9UBX2 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.07□□□□□ -1.6
DUX4Q9UBX2 uc_338.26-201ENST00000612659 160 ntBASIC5.07□□□□□ -1.6
DUX4Q9UBX2 AC015712.7-201ENST00000615211 635 ntBASIC5.07□□□□□ -1.6
DUX4Q9UBX2 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
DUX4Q9UBX2 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.07□□□□□ -1.6
DUX4Q9UBX2 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
DUX4Q9UBX2 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.07□□□□□ -1.6
DUX4Q9UBX2 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.07□□□□□ -1.6
DUX4Q9UBX2 ABCC13-202ENST00000463099 3842 ntBASIC5.07□□□□□ -1.6
DUX4Q9UBX2 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
DUX4Q9UBX2 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.07□□□□□ -1.6
DUX4Q9UBX2 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.07□□□□□ -1.6
DUX4Q9UBX2 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.07□□□□□ -1.6
DUX4Q9UBX2 AC093225.1-201ENST00000506867 1408 ntBASIC5.06□□□□□ -1.6
DUX4Q9UBX2 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.06□□□□□ -1.6
DUX4Q9UBX2 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.06□□□□□ -1.6
DUX4Q9UBX2 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.06□□□□□ -1.6
DUX4Q9UBX2 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.06□□□□□ -1.6
DUX4Q9UBX2 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.06□□□□□ -1.6
DUX4Q9UBX2 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.06□□□□□ -1.6
DUX4Q9UBX2 RN7SKP269-201ENST00000365545 319 ntBASIC5.06□□□□□ -1.6
DUX4Q9UBX2 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
DUX4Q9UBX2 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.06□□□□□ -1.6
DUX4Q9UBX2 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC5.06□□□□□ -1.6
DUX4Q9UBX2 RNA5SP122-201ENST00000384457 108 ntBASIC5.06□□□□□ -1.6
DUX4Q9UBX2 AC087752.1-201ENST00000391360 558 ntBASIC5.06□□□□□ -1.6
DUX4Q9UBX2 AL354890.1-201ENST00000413730 346 ntBASIC5.06□□□□□ -1.6
DUX4Q9UBX2 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.06□□□□□ -1.6
DUX4Q9UBX2 RPS7P8-201ENST00000418311 581 ntBASIC5.06□□□□□ -1.6
DUX4Q9UBX2 RPS15AP30-201ENST00000420976 390 ntBASIC5.06□□□□□ -1.6
DUX4Q9UBX2 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.06□□□□□ -1.6
DUX4Q9UBX2 AC110602.1-201ENST00000437414 318 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 173 ms