Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
SCAPERQ9BY12 AC026951.1-201ENST00000559530 2459 ntBASIC8.42□□□□□ -1.06
SCAPERQ9BY12 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC8.42□□□□□ -1.06
SCAPERQ9BY12 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
SCAPERQ9BY12 AC016397.1-201ENST00000412463 242 ntBASIC8.42□□□□□ -1.06
SCAPERQ9BY12 RPS3AP53-201ENST00000454716 778 ntBASIC8.42□□□□□ -1.06
SCAPERQ9BY12 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC8.42□□□□□ -1.06
SCAPERQ9BY12 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC8.42□□□□□ -1.06
SCAPERQ9BY12 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC8.42□□□□□ -1.06
SCAPERQ9BY12 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC8.42□□□□□ -1.06
SCAPERQ9BY12 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC8.42□□□□□ -1.06
SCAPERQ9BY12 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC8.42□□□□□ -1.06
SCAPERQ9BY12 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC8.42□□□□□ -1.06
SCAPERQ9BY12 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC8.42□□□□□ -1.06
SCAPERQ9BY12 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
SCAPERQ9BY12 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC8.42□□□□□ -1.06
SCAPERQ9BY12 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
SCAPERQ9BY12 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
SCAPERQ9BY12 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC8.41□□□□□ -1.06
SCAPERQ9BY12 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
SCAPERQ9BY12 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
SCAPERQ9BY12 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC8.41□□□□□ -1.06
SCAPERQ9BY12 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC8.41□□□□□ -1.06
SCAPERQ9BY12 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
SCAPERQ9BY12 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
SCAPERQ9BY12 AL133388.1-201ENST00000404509 287 ntBASIC8.41□□□□□ -1.06
SCAPERQ9BY12 SRSF1P1-201ENST00000424058 520 ntBASIC8.41□□□□□ -1.06
SCAPERQ9BY12 AC016027.5-201ENST00000427227 210 ntBASIC8.41□□□□□ -1.06
SCAPERQ9BY12 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC8.41□□□□□ -1.06
SCAPERQ9BY12 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
SCAPERQ9BY12 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC8.41□□□□□ -1.06
SCAPERQ9BY12 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC8.41□□□□□ -1.06
SCAPERQ9BY12 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC8.41□□□□□ -1.06
SCAPERQ9BY12 AL049779.3-201ENST00000557141 606 ntBASIC8.41□□□□□ -1.06
SCAPERQ9BY12 AC018558.5-201ENST00000565840 952 ntBASIC8.41□□□□□ -1.06
SCAPERQ9BY12 MIR4697-201ENST00000582977 78 ntBASIC8.41□□□□□ -1.06
SCAPERQ9BY12 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC8.41□□□□□ -1.06
SCAPERQ9BY12 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC8.41□□□□□ -1.06
SCAPERQ9BY12 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC8.41□□□□□ -1.06
SCAPERQ9BY12 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC8.41□□□□□ -1.06
SCAPERQ9BY12 OR55B1P-203ENST00000641518 2602 ntBASIC8.41□□□□□ -1.06
SCAPERQ9BY12 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
SCAPERQ9BY12 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
SCAPERQ9BY12 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
SCAPERQ9BY12 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
SCAPERQ9BY12 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
SCAPERQ9BY12 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
SCAPERQ9BY12 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
SCAPERQ9BY12 AC005831.1-201ENST00000624384 1697 ntBASIC8.4□□□□□ -1.06
SCAPERQ9BY12 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC8.4□□□□□ -1.06
SCAPERQ9BY12 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
SCAPERQ9BY12 AL117378.2-201ENST00000622916 1337 ntBASIC8.4□□□□□ -1.06
SCAPERQ9BY12 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC8.4□□□□□ -1.06
SCAPERQ9BY12 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
SCAPERQ9BY12 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
SCAPERQ9BY12 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC8.4□□□□□ -1.06
SCAPERQ9BY12 ADIG-201ENST00000373348 430 ntTSL 2 BASIC8.4□□□□□ -1.06
SCAPERQ9BY12 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
SCAPERQ9BY12 AC013442.1-201ENST00000397347 228 ntBASIC8.4□□□□□ -1.06
SCAPERQ9BY12 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
SCAPERQ9BY12 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC8.4□□□□□ -1.06
SCAPERQ9BY12 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC8.4□□□□□ -1.06
SCAPERQ9BY12 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC8.4□□□□□ -1.06
SCAPERQ9BY12 MIR3934-201ENST00000579806 107 ntBASIC8.4□□□□□ -1.06
SCAPERQ9BY12 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC8.4□□□□□ -1.06
SCAPERQ9BY12 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC8.4□□□□□ -1.06
SCAPERQ9BY12 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
SCAPERQ9BY12 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
SCAPERQ9BY12 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC8.4□□□□□ -1.06
SCAPERQ9BY12 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC8.4□□□□□ -1.06
SCAPERQ9BY12 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC8.4□□□□□ -1.06
SCAPERQ9BY12 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
SCAPERQ9BY12 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
SCAPERQ9BY12 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
SCAPERQ9BY12 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.07
SCAPERQ9BY12 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
SCAPERQ9BY12 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
SCAPERQ9BY12 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC8.39□□□□□ -1.07
SCAPERQ9BY12 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC8.39□□□□□ -1.07
SCAPERQ9BY12 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
SCAPERQ9BY12 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC8.39□□□□□ -1.07
SCAPERQ9BY12 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC8.39□□□□□ -1.07
SCAPERQ9BY12 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
SCAPERQ9BY12 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
SCAPERQ9BY12 SNORA17.1-201ENST00000362945 126 ntBASIC8.39□□□□□ -1.07
SCAPERQ9BY12 RNA5SP87-201ENST00000384155 118 ntBASIC8.39□□□□□ -1.07
SCAPERQ9BY12 PPP2R2DP1-201ENST00000420526 637 ntBASIC8.39□□□□□ -1.07
SCAPERQ9BY12 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
SCAPERQ9BY12 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC8.39□□□□□ -1.07
SCAPERQ9BY12 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC8.39□□□□□ -1.07
SCAPERQ9BY12 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
SCAPERQ9BY12 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC8.39□□□□□ -1.07
SCAPERQ9BY12 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC8.39□□□□□ -1.07
SCAPERQ9BY12 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC8.39□□□□□ -1.07
SCAPERQ9BY12 AP001885.1-201ENST00000621658 558 ntBASIC8.39□□□□□ -1.07
SCAPERQ9BY12 AC010168.2-201ENST00000562691 5428 ntBASIC8.39□□□□□ -1.07
SCAPERQ9BY12 OLMALINC-203ENST00000641087 3779 ntBASIC8.39□□□□□ -1.07
SCAPERQ9BY12 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
SCAPERQ9BY12 AC012618.3-205ENST00000637896 1496 ntBASIC8.39□□□□□ -1.07
SCAPERQ9BY12 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 202.3 ms