Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 CLIC4P1-201ENST00000453177 535 ntBASIC7.33□□□□□ -1.24
SMC1BQ8NDV3 RPL7AP6-201ENST00000477943 801 ntBASIC7.33□□□□□ -1.24
SMC1BQ8NDV3 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC7.33□□□□□ -1.24
SMC1BQ8NDV3 OR9N1P-202ENST00000494289 481 ntBASIC7.33□□□□□ -1.24
SMC1BQ8NDV3 RPL15P21-201ENST00000495592 567 ntBASIC7.33□□□□□ -1.24
SMC1BQ8NDV3 NENFP3-201ENST00000503735 313 ntBASIC7.33□□□□□ -1.24
SMC1BQ8NDV3 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC7.33□□□□□ -1.24
SMC1BQ8NDV3 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC7.33□□□□□ -1.24
SMC1BQ8NDV3 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC7.33□□□□□ -1.24
SMC1BQ8NDV3 AC010343.2-201ENST00000510162 224 ntBASIC7.33□□□□□ -1.24
SMC1BQ8NDV3 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC7.33□□□□□ -1.24
SMC1BQ8NDV3 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC7.33□□□□□ -1.24
SMC1BQ8NDV3 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC7.33□□□□□ -1.24
SMC1BQ8NDV3 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC7.33□□□□□ -1.24
SMC1BQ8NDV3 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC7.33□□□□□ -1.24
SMC1BQ8NDV3 HNRNPCP1-201ENST00000556181 766 ntBASIC7.33□□□□□ -1.24
SMC1BQ8NDV3 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC7.33□□□□□ -1.24
SMC1BQ8NDV3 AC018558.5-201ENST00000565840 952 ntBASIC7.33□□□□□ -1.24
SMC1BQ8NDV3 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC7.33□□□□□ -1.24
SMC1BQ8NDV3 AC010463.3-201ENST00000594077 500 ntBASIC7.33□□□□□ -1.24
SMC1BQ8NDV3 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC7.33□□□□□ -1.24
SMC1BQ8NDV3 HMGB1P51-201ENST00000605166 638 ntBASIC7.33□□□□□ -1.24
SMC1BQ8NDV3 AL050303.3-201ENST00000613704 284 ntBASIC7.33□□□□□ -1.24
SMC1BQ8NDV3 AC097520.1-201ENST00000624435 385 ntBASIC7.33□□□□□ -1.24
SMC1BQ8NDV3 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC7.33□□□□□ -1.24
SMC1BQ8NDV3 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC7.33□□□□□ -1.24
SMC1BQ8NDV3 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC7.33□□□□□ -1.24
SMC1BQ8NDV3 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC7.33□□□□□ -1.24
SMC1BQ8NDV3 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
SMC1BQ8NDV3 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
SMC1BQ8NDV3 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC7.33□□□□□ -1.24
SMC1BQ8NDV3 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC7.33□□□□□ -1.24
SMC1BQ8NDV3 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC7.33□□□□□ -1.24
SMC1BQ8NDV3 AC093278.2-201ENST00000564956 2485 ntBASIC7.33□□□□□ -1.24
SMC1BQ8NDV3 AC009501.3-201ENST00000605001 1352 ntBASIC7.33□□□□□ -1.24
SMC1BQ8NDV3 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC7.32□□□□□ -1.24
SMC1BQ8NDV3 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SMC1BQ8NDV3 AL929601.4-201ENST00000613011 1341 ntBASIC7.32□□□□□ -1.24
SMC1BQ8NDV3 FTO-215ENST00000636491 1676 ntTSL 5 BASIC7.32□□□□□ -1.24
SMC1BQ8NDV3 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SMC1BQ8NDV3 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
SMC1BQ8NDV3 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
SMC1BQ8NDV3 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SMC1BQ8NDV3 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SMC1BQ8NDV3 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SMC1BQ8NDV3 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC7.32□□□□□ -1.24
SMC1BQ8NDV3 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
SMC1BQ8NDV3 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SMC1BQ8NDV3 RNU6-650P-201ENST00000365658 111 ntBASIC7.32□□□□□ -1.24
SMC1BQ8NDV3 AL356967.1-201ENST00000406305 431 ntBASIC7.32□□□□□ -1.24
SMC1BQ8NDV3 GAS5-202ENST00000414075 413 ntTSL 2 BASIC7.32□□□□□ -1.24
SMC1BQ8NDV3 AL596448.1-201ENST00000415024 392 ntBASIC7.32□□□□□ -1.24
SMC1BQ8NDV3 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC7.32□□□□□ -1.24
SMC1BQ8NDV3 VN1R54P-201ENST00000435210 1049 ntBASIC7.32□□□□□ -1.24
SMC1BQ8NDV3 AC012075.1-201ENST00000436549 580 ntBASIC7.32□□□□□ -1.24
SMC1BQ8NDV3 AL606517.1-201ENST00000446914 387 ntBASIC7.32□□□□□ -1.24
SMC1BQ8NDV3 MORF4-201ENST00000447135 971 ntBASIC7.32□□□□□ -1.24
SMC1BQ8NDV3 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC7.32□□□□□ -1.24
SMC1BQ8NDV3 AL355032.1-201ENST00000472981 438 ntBASIC7.32□□□□□ -1.24
SMC1BQ8NDV3 AC108729.2-201ENST00000476543 840 ntBASIC7.32□□□□□ -1.24
SMC1BQ8NDV3 AC112198.4-201ENST00000515450 351 ntBASIC7.32□□□□□ -1.24
SMC1BQ8NDV3 RNU6-1102P-201ENST00000516149 96 ntBASIC7.32□□□□□ -1.24
SMC1BQ8NDV3 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC7.32□□□□□ -1.24
SMC1BQ8NDV3 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC7.32□□□□□ -1.24
SMC1BQ8NDV3 AC016144.1-201ENST00000548175 1087 ntBASIC7.32□□□□□ -1.24
SMC1BQ8NDV3 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SMC1BQ8NDV3 AL049872.1-201ENST00000556323 322 ntBASIC7.32□□□□□ -1.24
SMC1BQ8NDV3 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC7.32□□□□□ -1.24
SMC1BQ8NDV3 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC7.32□□□□□ -1.24
SMC1BQ8NDV3 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC7.32□□□□□ -1.24
SMC1BQ8NDV3 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
SMC1BQ8NDV3 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC7.32□□□□□ -1.24
SMC1BQ8NDV3 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC7.32□□□□□ -1.24
SMC1BQ8NDV3 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC7.32□□□□□ -1.24
SMC1BQ8NDV3 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SMC1BQ8NDV3 CYCSP1-201ENST00000604815 315 ntBASIC7.32□□□□□ -1.24
SMC1BQ8NDV3 CR589904.2-201ENST00000612533 440 ntBASIC7.32□□□□□ -1.24
SMC1BQ8NDV3 AC100827.5-201ENST00000615883 426 ntBASIC7.32□□□□□ -1.24
SMC1BQ8NDV3 AC109809.1-201ENST00000619665 545 ntBASIC7.32□□□□□ -1.24
SMC1BQ8NDV3 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC7.32□□□□□ -1.24
SMC1BQ8NDV3 AP000770.2-201ENST00000623694 100 ntBASIC7.32□□□□□ -1.24
SMC1BQ8NDV3 AC079298.2-201ENST00000623885 459 ntBASIC7.32□□□□□ -1.24
SMC1BQ8NDV3 METTL15-211ENST00000634762 718 ntTSL 5 BASIC7.32□□□□□ -1.24
SMC1BQ8NDV3 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC7.32□□□□□ -1.24
SMC1BQ8NDV3 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SMC1BQ8NDV3 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SMC1BQ8NDV3 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC7.32□□□□□ -1.24
SMC1BQ8NDV3 AC024651.2-201ENST00000562480 2098 ntBASIC7.32□□□□□ -1.24
SMC1BQ8NDV3 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SMC1BQ8NDV3 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
SMC1BQ8NDV3 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SMC1BQ8NDV3 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SMC1BQ8NDV3 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SMC1BQ8NDV3 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC7.31□□□□□ -1.24
SMC1BQ8NDV3 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
SMC1BQ8NDV3 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
SMC1BQ8NDV3 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC7.31□□□□□ -1.24
SMC1BQ8NDV3 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC7.31□□□□□ -1.24
SMC1BQ8NDV3 YES1P1-201ENST00000418510 1628 ntBASIC7.31□□□□□ -1.24
SMC1BQ8NDV3 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC7.31□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms