Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 TMSB4XP2-201ENST00000335179 210 ntBASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 AL357078.2-201ENST00000416486 427 ntBASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 BX284632.2-201ENST00000421091 399 ntBASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 AL512605.1-202ENST00000441919 381 ntBASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 RPL5P10-201ENST00000445207 894 ntBASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 AL359955.2-201ENST00000445380 353 ntBASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 Z83838.1-202ENST00000456225 839 ntBASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 AC068228.1-201ENST00000461723 211 ntBASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 RN7SL741P-201ENST00000482473 289 ntBASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 AC113398.2-201ENST00000507630 558 ntBASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 AC105384.2-201ENST00000508433 640 ntBASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 RNA5SP473-201ENST00000516402 125 ntBASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 DPPA3P2-202ENST00000557188 1219 ntBASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 AL356801.1-201ENST00000559320 294 ntBASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 MIR6793-201ENST00000612376 63 ntBASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 AC097641.3-201ENST00000613523 464 ntBASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 AC016957.2-201ENST00000616998 848 ntBASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 AP003400.2-201ENST00000624036 666 ntBASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 AC010872.1-201ENST00000624225 675 ntBASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 MTCO1P1-201ENST00000624263 1081 ntBASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 AC009135.2-201ENST00000624136 1768 ntBASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
ZNF549Q6P9A3 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.74□□□□□ -1.49
ZNF549Q6P9A3 AC140479.2-201ENST00000421567 3130 ntBASIC5.74□□□□□ -1.49
ZNF549Q6P9A3 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
ZNF549Q6P9A3 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
ZNF549Q6P9A3 AC068446.1-201ENST00000556425 1549 ntBASIC5.74□□□□□ -1.49
ZNF549Q6P9A3 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.74□□□□□ -1.49
ZNF549Q6P9A3 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
ZNF549Q6P9A3 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
ZNF549Q6P9A3 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
ZNF549Q6P9A3 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
ZNF549Q6P9A3 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.74□□□□□ -1.49
ZNF549Q6P9A3 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
ZNF549Q6P9A3 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
ZNF549Q6P9A3 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
ZNF549Q6P9A3 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.74□□□□□ -1.49
ZNF549Q6P9A3 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.74□□□□□ -1.49
ZNF549Q6P9A3 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.74□□□□□ -1.49
ZNF549Q6P9A3 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.74□□□□□ -1.49
ZNF549Q6P9A3 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.74□□□□□ -1.49
ZNF549Q6P9A3 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.74□□□□□ -1.49
ZNF549Q6P9A3 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.74□□□□□ -1.49
ZNF549Q6P9A3 METTL15P3-201ENST00000415522 1221 ntBASIC5.74□□□□□ -1.49
ZNF549Q6P9A3 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC5.74□□□□□ -1.49
ZNF549Q6P9A3 FAR1P1-201ENST00000427163 934 ntBASIC5.74□□□□□ -1.49
ZNF549Q6P9A3 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC5.74□□□□□ -1.49
ZNF549Q6P9A3 DEFA9P-201ENST00000433042 285 ntBASIC5.74□□□□□ -1.49
ZNF549Q6P9A3 SUMO2P8-201ENST00000434672 286 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms