Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
CTDP1Q9Y5B0 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC7.11□□□□□ -1.27
CTDP1Q9Y5B0 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
CTDP1Q9Y5B0 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC7.11□□□□□ -1.27
CTDP1Q9Y5B0 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
CTDP1Q9Y5B0 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CTDP1Q9Y5B0 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CTDP1Q9Y5B0 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
CTDP1Q9Y5B0 AC020633.1-201ENST00000468439 2247 ntBASIC7.11□□□□□ -1.27
CTDP1Q9Y5B0 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CTDP1Q9Y5B0 AC112255.1-201ENST00000624070 2493 ntBASIC7.1□□□□□ -1.27
CTDP1Q9Y5B0 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CTDP1Q9Y5B0 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC7.1□□□□□ -1.27
CTDP1Q9Y5B0 AC011416.1-201ENST00000514947 1732 ntBASIC7.1□□□□□ -1.27
CTDP1Q9Y5B0 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CTDP1Q9Y5B0 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CTDP1Q9Y5B0 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CTDP1Q9Y5B0 RNU6-386P-201ENST00000362650 107 ntBASIC7.1□□□□□ -1.27
CTDP1Q9Y5B0 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CTDP1Q9Y5B0 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
CTDP1Q9Y5B0 MIR122-201ENST00000385044 85 ntBASIC7.1□□□□□ -1.27
CTDP1Q9Y5B0 LYPLA1P3-201ENST00000402650 695 ntBASIC7.1□□□□□ -1.27
CTDP1Q9Y5B0 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC7.1□□□□□ -1.27
CTDP1Q9Y5B0 AL512504.1-201ENST00000415494 778 ntBASIC7.1□□□□□ -1.27
CTDP1Q9Y5B0 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC7.1□□□□□ -1.27
CTDP1Q9Y5B0 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC7.1□□□□□ -1.27
CTDP1Q9Y5B0 NAP1L4P2-201ENST00000425958 899 ntBASIC7.1□□□□□ -1.27
CTDP1Q9Y5B0 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC7.1□□□□□ -1.27
CTDP1Q9Y5B0 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CTDP1Q9Y5B0 HMGN1P5-201ENST00000448591 263 ntBASIC7.1□□□□□ -1.27
CTDP1Q9Y5B0 OR2A1-AS1-202ENST00000467944 422 ntBASIC7.1□□□□□ -1.27
CTDP1Q9Y5B0 SEPT7P6-201ENST00000469999 1143 ntBASIC7.1□□□□□ -1.27
CTDP1Q9Y5B0 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC7.1□□□□□ -1.27
CTDP1Q9Y5B0 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC7.1□□□□□ -1.27
CTDP1Q9Y5B0 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CTDP1Q9Y5B0 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CTDP1Q9Y5B0 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC7.1□□□□□ -1.27
CTDP1Q9Y5B0 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
CTDP1Q9Y5B0 RNU6-760P-201ENST00000516078 97 ntBASIC7.1□□□□□ -1.27
CTDP1Q9Y5B0 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC7.1□□□□□ -1.27
CTDP1Q9Y5B0 IGLVIV-66-1-201ENST00000521832 460 ntBASIC7.1□□□□□ -1.27
CTDP1Q9Y5B0 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC7.1□□□□□ -1.27
CTDP1Q9Y5B0 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CTDP1Q9Y5B0 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC7.1□□□□□ -1.27
CTDP1Q9Y5B0 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC7.1□□□□□ -1.27
CTDP1Q9Y5B0 MTATP6P2-201ENST00000603319 678 ntBASIC7.1□□□□□ -1.27
CTDP1Q9Y5B0 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC7.1□□□□□ -1.27
CTDP1Q9Y5B0 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC7.1□□□□□ -1.27
CTDP1Q9Y5B0 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
CTDP1Q9Y5B0 CDY5P-201ENST00000411487 1580 ntBASIC7.1□□□□□ -1.27
CTDP1Q9Y5B0 CDY9P-201ENST00000451397 1580 ntBASIC7.1□□□□□ -1.27
CTDP1Q9Y5B0 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CTDP1Q9Y5B0 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CTDP1Q9Y5B0 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC7.1□□□□□ -1.27
CTDP1Q9Y5B0 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC7.1□□□□□ -1.27
CTDP1Q9Y5B0 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC7.1□□□□□ -1.27
CTDP1Q9Y5B0 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CTDP1Q9Y5B0 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC7.1□□□□□ -1.27
CTDP1Q9Y5B0 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
CTDP1Q9Y5B0 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CTDP1Q9Y5B0 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CTDP1Q9Y5B0 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CTDP1Q9Y5B0 SEPT7P7-201ENST00000420492 1301 ntBASIC7.09□□□□□ -1.27
CTDP1Q9Y5B0 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
CTDP1Q9Y5B0 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
CTDP1Q9Y5B0 OR11H13P-201ENST00000359695 979 ntBASIC7.09□□□□□ -1.27
CTDP1Q9Y5B0 RNA5SP477-201ENST00000362639 119 ntBASIC7.09□□□□□ -1.27
CTDP1Q9Y5B0 RNA5SP375-201ENST00000362975 119 ntBASIC7.09□□□□□ -1.27
CTDP1Q9Y5B0 RNA5SP333-201ENST00000363466 118 ntBASIC7.09□□□□□ -1.27
CTDP1Q9Y5B0 RNA5SP334-201ENST00000364825 118 ntBASIC7.09□□□□□ -1.27
CTDP1Q9Y5B0 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
CTDP1Q9Y5B0 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
CTDP1Q9Y5B0 AL358178.1-201ENST00000407698 397 ntBASIC7.09□□□□□ -1.27
CTDP1Q9Y5B0 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC7.09□□□□□ -1.27
CTDP1Q9Y5B0 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC7.09□□□□□ -1.27
CTDP1Q9Y5B0 GTF2IP5-201ENST00000414608 731 ntBASIC7.09□□□□□ -1.27
CTDP1Q9Y5B0 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC7.09□□□□□ -1.27
CTDP1Q9Y5B0 AL445528.1-201ENST00000426330 420 ntBASIC7.09□□□□□ -1.27
CTDP1Q9Y5B0 CDY8P-201ENST00000428380 1279 ntBASIC7.09□□□□□ -1.27
CTDP1Q9Y5B0 AL117351.1-201ENST00000438864 766 ntBASIC7.09□□□□□ -1.27
CTDP1Q9Y5B0 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC7.09□□□□□ -1.27
CTDP1Q9Y5B0 ZNF619P1-201ENST00000446539 752 ntBASIC7.09□□□□□ -1.27
CTDP1Q9Y5B0 CDY20P-201ENST00000447528 1279 ntBASIC7.09□□□□□ -1.27
CTDP1Q9Y5B0 RPL31P15-201ENST00000449770 338 ntBASIC7.09□□□□□ -1.27
CTDP1Q9Y5B0 OR2AF1P-201ENST00000454899 889 ntBASIC7.09□□□□□ -1.27
CTDP1Q9Y5B0 AL356390.1-201ENST00000455684 397 ntBASIC7.09□□□□□ -1.27
CTDP1Q9Y5B0 AC108729.2-201ENST00000476543 840 ntBASIC7.09□□□□□ -1.27
CTDP1Q9Y5B0 RPEP1-201ENST00000504507 658 ntBASIC7.09□□□□□ -1.27
CTDP1Q9Y5B0 AC096571.1-202ENST00000506634 735 ntBASIC7.09□□□□□ -1.27
CTDP1Q9Y5B0 Y_RNA.667-201ENST00000516212 107 ntBASIC7.09□□□□□ -1.27
CTDP1Q9Y5B0 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC7.09□□□□□ -1.27
CTDP1Q9Y5B0 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC7.09□□□□□ -1.27
CTDP1Q9Y5B0 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC7.09□□□□□ -1.27
CTDP1Q9Y5B0 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC7.09□□□□□ -1.27
CTDP1Q9Y5B0 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC7.09□□□□□ -1.27
CTDP1Q9Y5B0 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC7.09□□□□□ -1.27
CTDP1Q9Y5B0 RN7SL753P-201ENST00000581238 290 ntBASIC7.09□□□□□ -1.27
CTDP1Q9Y5B0 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC7.09□□□□□ -1.27
CTDP1Q9Y5B0 NPM1P45-201ENST00000583151 559 ntBASIC7.09□□□□□ -1.27
CTDP1Q9Y5B0 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC7.09□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms