Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 GTF3AP1-201ENST00000416942 1004 ntBASIC7.24□□□□□ -1.25
CHMP4CQ96CF2 AC015977.1-201ENST00000418887 292 ntBASIC7.24□□□□□ -1.25
CHMP4CQ96CF2 AC066692.1-201ENST00000421721 457 ntBASIC7.24□□□□□ -1.25
CHMP4CQ96CF2 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC7.24□□□□□ -1.25
CHMP4CQ96CF2 MTND2P21-201ENST00000436242 1042 ntBASIC7.24□□□□□ -1.25
CHMP4CQ96CF2 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CHMP4CQ96CF2 AC009963.3-201ENST00000458090 486 ntBASIC7.24□□□□□ -1.25
CHMP4CQ96CF2 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CHMP4CQ96CF2 AC114781.3-201ENST00000512083 142 ntBASIC7.24□□□□□ -1.25
CHMP4CQ96CF2 NPM1P21-201ENST00000513394 762 ntBASIC7.24□□□□□ -1.25
CHMP4CQ96CF2 OR5H7P-201ENST00000514084 930 ntBASIC7.24□□□□□ -1.25
CHMP4CQ96CF2 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC7.24□□□□□ -1.25
CHMP4CQ96CF2 RN7SKP70-201ENST00000516655 271 ntBASIC7.24□□□□□ -1.25
CHMP4CQ96CF2 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC7.24□□□□□ -1.25
CHMP4CQ96CF2 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CHMP4CQ96CF2 CETN3-206ENST00000522864 738 ntTSL 3 BASIC7.24□□□□□ -1.25
CHMP4CQ96CF2 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC7.24□□□□□ -1.25
CHMP4CQ96CF2 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC7.24□□□□□ -1.25
CHMP4CQ96CF2 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC7.24□□□□□ -1.25
CHMP4CQ96CF2 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CHMP4CQ96CF2 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC7.24□□□□□ -1.25
CHMP4CQ96CF2 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC7.24□□□□□ -1.25
CHMP4CQ96CF2 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC7.24□□□□□ -1.25
CHMP4CQ96CF2 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC7.24□□□□□ -1.25
CHMP4CQ96CF2 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC7.24□□□□□ -1.25
CHMP4CQ96CF2 TEX41-218ENST00000596540 882 ntTSL 5 BASIC7.24□□□□□ -1.25
CHMP4CQ96CF2 AC012213.4-201ENST00000606457 354 ntBASIC7.24□□□□□ -1.25
CHMP4CQ96CF2 AC024933.1-201ENST00000608472 348 ntBASIC7.24□□□□□ -1.25
CHMP4CQ96CF2 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC7.24□□□□□ -1.25
CHMP4CQ96CF2 AP000240.1-201ENST00000609910 452 ntBASIC7.24□□□□□ -1.25
CHMP4CQ96CF2 AC092266.1-201ENST00000610958 165 ntBASIC7.24□□□□□ -1.25
CHMP4CQ96CF2 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC7.24□□□□□ -1.25
CHMP4CQ96CF2 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC7.24□□□□□ -1.25
CHMP4CQ96CF2 AP002512.4-202ENST00000641599 4530 ntBASIC7.24□□□□□ -1.25
CHMP4CQ96CF2 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC7.24□□□□□ -1.25
CHMP4CQ96CF2 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
CHMP4CQ96CF2 CASC19-238ENST00000641523 1558 ntBASIC7.24□□□□□ -1.25
CHMP4CQ96CF2 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
CHMP4CQ96CF2 AC008627.1-201ENST00000517511 1704 ntBASIC7.24□□□□□ -1.25
CHMP4CQ96CF2 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CHMP4CQ96CF2 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CHMP4CQ96CF2 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CHMP4CQ96CF2 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC7.23□□□□□ -1.25
CHMP4CQ96CF2 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC7.23□□□□□ -1.25
CHMP4CQ96CF2 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CHMP4CQ96CF2 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CHMP4CQ96CF2 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
CHMP4CQ96CF2 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CHMP4CQ96CF2 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC7.23□□□□□ -1.25
CHMP4CQ96CF2 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CHMP4CQ96CF2 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CHMP4CQ96CF2 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC7.23□□□□□ -1.25
CHMP4CQ96CF2 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CHMP4CQ96CF2 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC7.23□□□□□ -1.25
CHMP4CQ96CF2 SNORD51.1-201ENST00000365405 77 ntBASIC7.23□□□□□ -1.25
CHMP4CQ96CF2 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC7.23□□□□□ -1.25
CHMP4CQ96CF2 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CHMP4CQ96CF2 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC7.23□□□□□ -1.25
CHMP4CQ96CF2 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CHMP4CQ96CF2 AL365220.1-201ENST00000432923 399 ntBASIC7.23□□□□□ -1.25
CHMP4CQ96CF2 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC7.23□□□□□ -1.25
CHMP4CQ96CF2 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC7.23□□□□□ -1.25
CHMP4CQ96CF2 OR3D1P-201ENST00000438288 955 ntBASIC7.23□□□□□ -1.25
CHMP4CQ96CF2 SUMO2P1-206ENST00000445436 284 ntBASIC7.23□□□□□ -1.25
CHMP4CQ96CF2 ZNF619P1-201ENST00000446539 752 ntBASIC7.23□□□□□ -1.25
CHMP4CQ96CF2 AC144530.1-201ENST00000452862 555 ntBASIC7.23□□□□□ -1.25
CHMP4CQ96CF2 AC023194.2-201ENST00000465398 406 ntBASIC7.23□□□□□ -1.25
CHMP4CQ96CF2 CR383656.1-201ENST00000484916 377 ntBASIC7.23□□□□□ -1.25
CHMP4CQ96CF2 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC7.23□□□□□ -1.25
CHMP4CQ96CF2 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC7.23□□□□□ -1.25
CHMP4CQ96CF2 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC7.23□□□□□ -1.25
CHMP4CQ96CF2 CR383658.1-201ENST00000514609 734 ntBASIC7.23□□□□□ -1.25
CHMP4CQ96CF2 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC7.23□□□□□ -1.25
CHMP4CQ96CF2 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
CHMP4CQ96CF2 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC7.23□□□□□ -1.25
CHMP4CQ96CF2 AC002519.2-203ENST00000567043 837 ntBASIC7.23□□□□□ -1.25
CHMP4CQ96CF2 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC7.23□□□□□ -1.25
CHMP4CQ96CF2 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC7.23□□□□□ -1.25
CHMP4CQ96CF2 AC068768.2-201ENST00000602352 343 ntBASIC7.23□□□□□ -1.25
CHMP4CQ96CF2 AP001437.1-201ENST00000608783 456 ntBASIC7.23□□□□□ -1.25
CHMP4CQ96CF2 FAM27E2-201ENST00000619668 403 ntBASIC7.23□□□□□ -1.25
CHMP4CQ96CF2 AL137067.2-201ENST00000621202 131 ntBASIC7.23□□□□□ -1.25
CHMP4CQ96CF2 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC7.23□□□□□ -1.25
CHMP4CQ96CF2 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CHMP4CQ96CF2 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC7.23□□□□□ -1.25
CHMP4CQ96CF2 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
CHMP4CQ96CF2 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC7.23□□□□□ -1.25
CHMP4CQ96CF2 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CHMP4CQ96CF2 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
CHMP4CQ96CF2 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CHMP4CQ96CF2 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CHMP4CQ96CF2 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CHMP4CQ96CF2 AC009501.3-201ENST00000605001 1352 ntBASIC7.22□□□□□ -1.25
CHMP4CQ96CF2 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CHMP4CQ96CF2 AC022325.1-201ENST00000502748 2199 ntBASIC7.22□□□□□ -1.25
CHMP4CQ96CF2 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CHMP4CQ96CF2 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CHMP4CQ96CF2 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CHMP4CQ96CF2 FIG4-202ENST00000368941 791 ntTSL 3 BASIC7.22□□□□□ -1.25
CHMP4CQ96CF2 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms