Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC112Q8NEF3 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC112Q8NEF3 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC6.27□□□□□ -1.41
CCDC112Q8NEF3 RNF10P1-201ENST00000418589 369 ntBASIC6.27□□□□□ -1.41
CCDC112Q8NEF3 AC130360.1-201ENST00000425489 1117 ntBASIC6.27□□□□□ -1.41
CCDC112Q8NEF3 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC6.27□□□□□ -1.41
CCDC112Q8NEF3 AC069154.1-201ENST00000432914 542 ntBASIC6.27□□□□□ -1.41
CCDC112Q8NEF3 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC6.27□□□□□ -1.41
CCDC112Q8NEF3 OR7E116P-201ENST00000448529 957 ntBASIC6.27□□□□□ -1.41
CCDC112Q8NEF3 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.27□□□□□ -1.41
CCDC112Q8NEF3 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.27□□□□□ -1.41
CCDC112Q8NEF3 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC6.27□□□□□ -1.41
CCDC112Q8NEF3 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.27□□□□□ -1.41
CCDC112Q8NEF3 CR383658.1-201ENST00000514609 734 ntBASIC6.27□□□□□ -1.41
CCDC112Q8NEF3 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC6.27□□□□□ -1.41
CCDC112Q8NEF3 AC130365.2-201ENST00000525882 1201 ntBASIC6.27□□□□□ -1.41
CCDC112Q8NEF3 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.27□□□□□ -1.41
CCDC112Q8NEF3 AC005363.1-201ENST00000530779 351 ntBASIC6.27□□□□□ -1.41
CCDC112Q8NEF3 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC112Q8NEF3 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC6.27□□□□□ -1.41
CCDC112Q8NEF3 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC6.27□□□□□ -1.41
CCDC112Q8NEF3 AC139697.1-201ENST00000548429 745 ntBASIC6.27□□□□□ -1.41
CCDC112Q8NEF3 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC6.27□□□□□ -1.41
CCDC112Q8NEF3 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC6.27□□□□□ -1.41
CCDC112Q8NEF3 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC112Q8NEF3 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC6.27□□□□□ -1.41
CCDC112Q8NEF3 AP005136.2-201ENST00000583253 1049 ntBASIC6.27□□□□□ -1.41
CCDC112Q8NEF3 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC6.27□□□□□ -1.41
CCDC112Q8NEF3 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC112Q8NEF3 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC112Q8NEF3 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC112Q8NEF3 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC6.27□□□□□ -1.41
CCDC112Q8NEF3 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
CCDC112Q8NEF3 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC112Q8NEF3 AC011755.1-201ENST00000623763 2049 ntBASIC6.26□□□□□ -1.41
CCDC112Q8NEF3 AL022322.2-201ENST00000624072 20397 ntBASIC6.26□□□□□ -1.41
CCDC112Q8NEF3 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC6.26□□□□□ -1.41
CCDC112Q8NEF3 AP001284.1-201ENST00000528393 2118 ntBASIC6.26□□□□□ -1.41
CCDC112Q8NEF3 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
CCDC112Q8NEF3 IFIT1P1-201ENST00000400497 1449 ntBASIC6.26□□□□□ -1.41
CCDC112Q8NEF3 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC6.26□□□□□ -1.41
CCDC112Q8NEF3 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CCDC112Q8NEF3 QRSL1P1-201ENST00000400977 1540 ntBASIC6.26□□□□□ -1.41
CCDC112Q8NEF3 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CCDC112Q8NEF3 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CCDC112Q8NEF3 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CCDC112Q8NEF3 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.26□□□□□ -1.41
CCDC112Q8NEF3 SETP9-201ENST00000423837 832 ntBASIC6.26□□□□□ -1.41
CCDC112Q8NEF3 GAPDHP59-201ENST00000435908 267 ntBASIC6.26□□□□□ -1.41
CCDC112Q8NEF3 PCBP2P1-201ENST00000437262 977 ntBASIC6.26□□□□□ -1.41
CCDC112Q8NEF3 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.26□□□□□ -1.41
CCDC112Q8NEF3 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC6.26□□□□□ -1.41
CCDC112Q8NEF3 HMGB1P7-201ENST00000450921 612 ntBASIC6.26□□□□□ -1.41
CCDC112Q8NEF3 PSAT1P4-201ENST00000466500 526 ntBASIC6.26□□□□□ -1.41
CCDC112Q8NEF3 AL157777.1-201ENST00000468100 304 ntBASIC6.26□□□□□ -1.41
CCDC112Q8NEF3 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC6.26□□□□□ -1.41
CCDC112Q8NEF3 AC023424.1-201ENST00000496058 459 ntBASIC6.26□□□□□ -1.41
CCDC112Q8NEF3 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC6.26□□□□□ -1.41
CCDC112Q8NEF3 AC090568.1-201ENST00000509499 856 ntBASIC6.26□□□□□ -1.41
CCDC112Q8NEF3 TMEM97P2-201ENST00000517841 403 ntBASIC6.26□□□□□ -1.41
CCDC112Q8NEF3 DPPA3P2-202ENST00000557188 1219 ntBASIC6.26□□□□□ -1.41
CCDC112Q8NEF3 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.26□□□□□ -1.41
CCDC112Q8NEF3 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC6.26□□□□□ -1.41
CCDC112Q8NEF3 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.26□□□□□ -1.41
CCDC112Q8NEF3 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC6.26□□□□□ -1.41
CCDC112Q8NEF3 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CCDC112Q8NEF3 AL139099.4-201ENST00000614802 114 ntBASIC6.26□□□□□ -1.41
CCDC112Q8NEF3 AL359742.1-201ENST00000622497 540 ntBASIC6.26□□□□□ -1.41
CCDC112Q8NEF3 AP001962.1-201ENST00000624114 559 ntBASIC6.26□□□□□ -1.41
CCDC112Q8NEF3 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.26□□□□□ -1.41
CCDC112Q8NEF3 MFSD8-219ENST00000641228 2559 ntBASIC6.26□□□□□ -1.41
CCDC112Q8NEF3 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC6.26□□□□□ -1.41
CCDC112Q8NEF3 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CCDC112Q8NEF3 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC6.26□□□□□ -1.41
CCDC112Q8NEF3 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC112Q8NEF3 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.25□□□□□ -1.41
CCDC112Q8NEF3 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC112Q8NEF3 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.25□□□□□ -1.41
CCDC112Q8NEF3 MTCO1P28-201ENST00000574177 1528 ntBASIC6.25□□□□□ -1.41
CCDC112Q8NEF3 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
CCDC112Q8NEF3 AC012254.3-201ENST00000591183 2117 ntBASIC6.25□□□□□ -1.41
CCDC112Q8NEF3 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
CCDC112Q8NEF3 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
CCDC112Q8NEF3 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC112Q8NEF3 OR7E156P-201ENST00000400303 464 ntBASIC6.25□□□□□ -1.41
CCDC112Q8NEF3 RNA5SP198-201ENST00000410376 127 ntBASIC6.25□□□□□ -1.41
CCDC112Q8NEF3 VN1R3-201ENST00000418822 919 ntBASIC6.25□□□□□ -1.41
CCDC112Q8NEF3 AC019205.1-201ENST00000421830 730 ntBASIC6.25□□□□□ -1.41
CCDC112Q8NEF3 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC6.25□□□□□ -1.41
CCDC112Q8NEF3 TMEM183AP1-205ENST00000432739 290 ntBASIC6.25□□□□□ -1.41
CCDC112Q8NEF3 NDUFB4P8-201ENST00000435351 367 ntBASIC6.25□□□□□ -1.41
CCDC112Q8NEF3 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.25□□□□□ -1.41
CCDC112Q8NEF3 NPM1P19-201ENST00000450070 712 ntBASIC6.25□□□□□ -1.41
CCDC112Q8NEF3 AP002453.1-201ENST00000492327 668 ntBASIC6.25□□□□□ -1.41
CCDC112Q8NEF3 ENPP7P11-201ENST00000505915 627 ntBASIC6.25□□□□□ -1.41
CCDC112Q8NEF3 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.25□□□□□ -1.41
CCDC112Q8NEF3 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC6.25□□□□□ -1.41
CCDC112Q8NEF3 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6.25□□□□□ -1.41
CCDC112Q8NEF3 AC036111.2-201ENST00000533247 901 ntBASIC6.25□□□□□ -1.41
CCDC112Q8NEF3 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms