Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TRAPPC4Q9Y296 OOSP1P2-201ENST00000579644 351 ntBASIC5.29□□□□□ -1.56
TRAPPC4Q9Y296 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.29□□□□□ -1.56
TRAPPC4Q9Y296 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.29□□□□□ -1.56
TRAPPC4Q9Y296 AC006363.1-201ENST00000603806 463 ntBASIC5.29□□□□□ -1.56
TRAPPC4Q9Y296 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.29□□□□□ -1.56
TRAPPC4Q9Y296 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
TRAPPC4Q9Y296 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TRAPPC4Q9Y296 HSPA8P14-201ENST00000552265 1805 ntBASIC5.29□□□□□ -1.56
TRAPPC4Q9Y296 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TRAPPC4Q9Y296 AL603750.1-201ENST00000624216 1717 ntBASIC5.28□□□□□ -1.56
TRAPPC4Q9Y296 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.28□□□□□ -1.56
TRAPPC4Q9Y296 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TRAPPC4Q9Y296 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.28□□□□□ -1.56
TRAPPC4Q9Y296 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TRAPPC4Q9Y296 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TRAPPC4Q9Y296 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
TRAPPC4Q9Y296 AL137058.3-201ENST00000624531 3099 ntBASIC5.28□□□□□ -1.56
TRAPPC4Q9Y296 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
TRAPPC4Q9Y296 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
TRAPPC4Q9Y296 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TRAPPC4Q9Y296 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.28□□□□□ -1.56
TRAPPC4Q9Y296 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TRAPPC4Q9Y296 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TRAPPC4Q9Y296 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.28□□□□□ -1.56
TRAPPC4Q9Y296 SUGT1P2-201ENST00000379452 992 ntBASIC5.28□□□□□ -1.56
TRAPPC4Q9Y296 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.28□□□□□ -1.56
TRAPPC4Q9Y296 DEFA9P-201ENST00000433042 285 ntBASIC5.28□□□□□ -1.56
TRAPPC4Q9Y296 RPS12P17-201ENST00000438591 377 ntBASIC5.28□□□□□ -1.56
TRAPPC4Q9Y296 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
TRAPPC4Q9Y296 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.28□□□□□ -1.56
TRAPPC4Q9Y296 RPL38P3-201ENST00000484463 213 ntBASIC5.28□□□□□ -1.56
TRAPPC4Q9Y296 AC012123.2-201ENST00000485809 248 ntBASIC5.28□□□□□ -1.56
TRAPPC4Q9Y296 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC5.28□□□□□ -1.56
TRAPPC4Q9Y296 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.28□□□□□ -1.56
TRAPPC4Q9Y296 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.28□□□□□ -1.56
TRAPPC4Q9Y296 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.28□□□□□ -1.56
TRAPPC4Q9Y296 GARSP1-201ENST00000570895 719 ntBASIC5.28□□□□□ -1.56
TRAPPC4Q9Y296 AC134669.1-201ENST00000581275 672 ntBASIC5.28□□□□□ -1.56
TRAPPC4Q9Y296 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.28□□□□□ -1.56
TRAPPC4Q9Y296 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.28□□□□□ -1.56
TRAPPC4Q9Y296 AC079315.1-201ENST00000602952 623 ntBASIC5.28□□□□□ -1.56
TRAPPC4Q9Y296 FAM72A-208ENST00000607379 1139 ntBASIC5.28□□□□□ -1.56
TRAPPC4Q9Y296 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.28□□□□□ -1.56
TRAPPC4Q9Y296 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TRAPPC4Q9Y296 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.28□□□□□ -1.56
TRAPPC4Q9Y296 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TRAPPC4Q9Y296 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TRAPPC4Q9Y296 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
TRAPPC4Q9Y296 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TRAPPC4Q9Y296 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.28□□□□□ -1.56
TRAPPC4Q9Y296 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TRAPPC4Q9Y296 PDZK1P1-202ENST00000425209 1350 ntBASIC5.28□□□□□ -1.56
TRAPPC4Q9Y296 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TRAPPC4Q9Y296 OR9K1P-202ENST00000641111 3217 ntBASIC5.27□□□□□ -1.57
TRAPPC4Q9Y296 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
TRAPPC4Q9Y296 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
TRAPPC4Q9Y296 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.27□□□□□ -1.57
TRAPPC4Q9Y296 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.27□□□□□ -1.57
TRAPPC4Q9Y296 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.27□□□□□ -1.57
TRAPPC4Q9Y296 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TRAPPC4Q9Y296 RNA5SP273-201ENST00000362484 113 ntBASIC5.27□□□□□ -1.57
TRAPPC4Q9Y296 RNA5SP477-201ENST00000362639 119 ntBASIC5.27□□□□□ -1.57
TRAPPC4Q9Y296 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
TRAPPC4Q9Y296 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TRAPPC4Q9Y296 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.27□□□□□ -1.57
TRAPPC4Q9Y296 AC019205.1-201ENST00000421830 730 ntBASIC5.27□□□□□ -1.57
TRAPPC4Q9Y296 AL035660.1-201ENST00000422041 222 ntBASIC5.27□□□□□ -1.57
TRAPPC4Q9Y296 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.27□□□□□ -1.57
TRAPPC4Q9Y296 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.27□□□□□ -1.57
TRAPPC4Q9Y296 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.27□□□□□ -1.57
TRAPPC4Q9Y296 CYCSP51-201ENST00000443545 318 ntBASIC5.27□□□□□ -1.57
TRAPPC4Q9Y296 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.27□□□□□ -1.57
TRAPPC4Q9Y296 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.27□□□□□ -1.57
TRAPPC4Q9Y296 RN7SL57P-201ENST00000493687 290 ntBASIC5.27□□□□□ -1.57
TRAPPC4Q9Y296 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
TRAPPC4Q9Y296 BCAS2P1-201ENST00000528022 632 ntBASIC5.27□□□□□ -1.57
TRAPPC4Q9Y296 AC015689.2-201ENST00000528172 1738 ntBASIC5.27□□□□□ -1.57
TRAPPC4Q9Y296 AC090424.1-201ENST00000535243 736 ntBASIC5.27□□□□□ -1.57
TRAPPC4Q9Y296 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.27□□□□□ -1.57
TRAPPC4Q9Y296 AC006530.1-201ENST00000555980 571 ntBASIC5.27□□□□□ -1.57
TRAPPC4Q9Y296 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.27□□□□□ -1.57
TRAPPC4Q9Y296 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.27□□□□□ -1.57
TRAPPC4Q9Y296 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.27□□□□□ -1.57
TRAPPC4Q9Y296 AL499605.1-201ENST00000604628 403 ntBASIC5.27□□□□□ -1.57
TRAPPC4Q9Y296 XKRY2-202ENST00000623874 1581 ntBASIC5.27□□□□□ -1.57
TRAPPC4Q9Y296 XKRY-202ENST00000624960 1581 ntBASIC5.27□□□□□ -1.57
TRAPPC4Q9Y296 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.27□□□□□ -1.57
TRAPPC4Q9Y296 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.27□□□□□ -1.57
TRAPPC4Q9Y296 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
TRAPPC4Q9Y296 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TRAPPC4Q9Y296 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
TRAPPC4Q9Y296 AC117409.1-201ENST00000470499 1310 ntBASIC5.26□□□□□ -1.57
TRAPPC4Q9Y296 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.26□□□□□ -1.57
TRAPPC4Q9Y296 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TRAPPC4Q9Y296 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
TRAPPC4Q9Y296 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.26□□□□□ -1.57
TRAPPC4Q9Y296 AP001284.1-201ENST00000528393 2118 ntBASIC5.26□□□□□ -1.57
TRAPPC4Q9Y296 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TRAPPC4Q9Y296 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms