Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 AL353626.3-201ENST00000413399 657 ntBASIC7.24□□□□□ -1.25
RTFDC1Q9BY42 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC7.24□□□□□ -1.25
RTFDC1Q9BY42 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC7.24□□□□□ -1.25
RTFDC1Q9BY42 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC7.24□□□□□ -1.25
RTFDC1Q9BY42 RPS4XP5-201ENST00000419038 768 ntBASIC7.24□□□□□ -1.25
RTFDC1Q9BY42 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC7.24□□□□□ -1.25
RTFDC1Q9BY42 AC012075.1-201ENST00000436549 580 ntBASIC7.24□□□□□ -1.25
RTFDC1Q9BY42 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC7.24□□□□□ -1.25
RTFDC1Q9BY42 CYCSP51-201ENST00000443545 318 ntBASIC7.24□□□□□ -1.25
RTFDC1Q9BY42 AC005297.1-201ENST00000444765 862 ntBASIC7.24□□□□□ -1.25
RTFDC1Q9BY42 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC7.24□□□□□ -1.25
RTFDC1Q9BY42 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC7.24□□□□□ -1.25
RTFDC1Q9BY42 MTND2P39-201ENST00000457230 764 ntBASIC7.24□□□□□ -1.25
RTFDC1Q9BY42 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC7.24□□□□□ -1.25
RTFDC1Q9BY42 RN7SL72P-201ENST00000460697 269 ntBASIC7.24□□□□□ -1.25
RTFDC1Q9BY42 AC022215.1-201ENST00000481770 362 ntBASIC7.24□□□□□ -1.25
RTFDC1Q9BY42 AC068522.1-201ENST00000482895 345 ntBASIC7.24□□□□□ -1.25
RTFDC1Q9BY42 AP006245.2-201ENST00000522004 300 ntBASIC7.24□□□□□ -1.25
RTFDC1Q9BY42 HMGB1P42-201ENST00000532126 553 ntBASIC7.24□□□□□ -1.25
RTFDC1Q9BY42 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC7.24□□□□□ -1.25
RTFDC1Q9BY42 HCG18-243ENST00000602498 327 ntTSL 3 BASIC7.24□□□□□ -1.25
RTFDC1Q9BY42 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC7.24□□□□□ -1.25
RTFDC1Q9BY42 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC7.24□□□□□ -1.25
RTFDC1Q9BY42 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC7.24□□□□□ -1.25
RTFDC1Q9BY42 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC7.24□□□□□ -1.25
RTFDC1Q9BY42 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
RTFDC1Q9BY42 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
RTFDC1Q9BY42 CR1-204ENST00000367052 7469 ntTSL 5 BASIC7.24□□□□□ -1.25
RTFDC1Q9BY42 CR1-205ENST00000367053 7469 ntTSL 5 BASIC7.24□□□□□ -1.25
RTFDC1Q9BY42 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
RTFDC1Q9BY42 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
RTFDC1Q9BY42 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
RTFDC1Q9BY42 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
RTFDC1Q9BY42 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
RTFDC1Q9BY42 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
RTFDC1Q9BY42 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
RTFDC1Q9BY42 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
RTFDC1Q9BY42 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
RTFDC1Q9BY42 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
RTFDC1Q9BY42 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC7.23□□□□□ -1.25
RTFDC1Q9BY42 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC7.23□□□□□ -1.25
RTFDC1Q9BY42 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC7.23□□□□□ -1.25
RTFDC1Q9BY42 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
RTFDC1Q9BY42 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RTFDC1Q9BY42 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
RTFDC1Q9BY42 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
RTFDC1Q9BY42 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
RTFDC1Q9BY42 AL356968.2-201ENST00000412769 1257 ntBASIC7.23□□□□□ -1.25
RTFDC1Q9BY42 OR6E1P-201ENST00000414424 923 ntBASIC7.23□□□□□ -1.25
RTFDC1Q9BY42 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC7.23□□□□□ -1.25
RTFDC1Q9BY42 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC7.23□□□□□ -1.25
RTFDC1Q9BY42 FABP5P2-201ENST00000439042 408 ntBASIC7.23□□□□□ -1.25
RTFDC1Q9BY42 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC7.23□□□□□ -1.25
RTFDC1Q9BY42 OR13K1P-201ENST00000444577 975 ntBASIC7.23□□□□□ -1.25
RTFDC1Q9BY42 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC7.23□□□□□ -1.25
RTFDC1Q9BY42 AP002345.1-201ENST00000456493 928 ntBASIC7.23□□□□□ -1.25
RTFDC1Q9BY42 RN7SL610P-201ENST00000463845 291 ntBASIC7.23□□□□□ -1.25
RTFDC1Q9BY42 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC7.23□□□□□ -1.25
RTFDC1Q9BY42 AC105918.1-201ENST00000474399 838 ntBASIC7.23□□□□□ -1.25
RTFDC1Q9BY42 UBA52P7-201ENST00000486088 380 ntBASIC7.23□□□□□ -1.25
RTFDC1Q9BY42 RPS26P24-201ENST00000497656 331 ntBASIC7.23□□□□□ -1.25
RTFDC1Q9BY42 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
RTFDC1Q9BY42 MINCR-206ENST00000524335 499 ntTSL 2 BASIC7.23□□□□□ -1.25
RTFDC1Q9BY42 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC7.23□□□□□ -1.25
RTFDC1Q9BY42 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC7.23□□□□□ -1.25
RTFDC1Q9BY42 AL049872.1-201ENST00000556323 322 ntBASIC7.23□□□□□ -1.25
RTFDC1Q9BY42 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC7.23□□□□□ -1.25
RTFDC1Q9BY42 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC7.23□□□□□ -1.25
RTFDC1Q9BY42 AL359513.1-201ENST00000614364 557 ntBASIC7.23□□□□□ -1.25
RTFDC1Q9BY42 AL139099.4-201ENST00000614802 114 ntBASIC7.23□□□□□ -1.25
RTFDC1Q9BY42 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
RTFDC1Q9BY42 AP003499.2-201ENST00000624100 483 ntBASIC7.23□□□□□ -1.25
RTFDC1Q9BY42 AC063952.1-203ENST00000634410 658 ntBASIC7.23□□□□□ -1.25
RTFDC1Q9BY42 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC7.23□□□□□ -1.25
RTFDC1Q9BY42 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
RTFDC1Q9BY42 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC7.23□□□□□ -1.25
RTFDC1Q9BY42 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
RTFDC1Q9BY42 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
RTFDC1Q9BY42 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
RTFDC1Q9BY42 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RTFDC1Q9BY42 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC7.23□□□□□ -1.25
RTFDC1Q9BY42 NBPF8-201ENST00000583271 5330 ntBASIC7.23□□□□□ -1.25
RTFDC1Q9BY42 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RTFDC1Q9BY42 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RTFDC1Q9BY42 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
RTFDC1Q9BY42 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
RTFDC1Q9BY42 AOX3P-204ENST00000491025 2107 ntBASIC7.22□□□□□ -1.25
RTFDC1Q9BY42 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
RTFDC1Q9BY42 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
RTFDC1Q9BY42 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
RTFDC1Q9BY42 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
RTFDC1Q9BY42 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
RTFDC1Q9BY42 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
RTFDC1Q9BY42 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
RTFDC1Q9BY42 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC7.22□□□□□ -1.25
RTFDC1Q9BY42 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC7.22□□□□□ -1.25
RTFDC1Q9BY42 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC7.22□□□□□ -1.25
RTFDC1Q9BY42 TNPO1P1-201ENST00000423641 1138 ntBASIC7.22□□□□□ -1.25
RTFDC1Q9BY42 NPM1P22-201ENST00000427761 952 ntBASIC7.22□□□□□ -1.25
RTFDC1Q9BY42 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC7.22□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms