Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.4□□□□□ -1.54
SHFQ7M4L6 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC5.4□□□□□ -1.54
SHFQ7M4L6 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.4□□□□□ -1.54
SHFQ7M4L6 MTATP6P9-201ENST00000515039 680 ntBASIC5.4□□□□□ -1.54
SHFQ7M4L6 snoU109.5-201ENST00000516231 132 ntBASIC5.4□□□□□ -1.54
SHFQ7M4L6 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.4□□□□□ -1.54
SHFQ7M4L6 AC136777.2-201ENST00000522979 358 ntBASIC5.4□□□□□ -1.54
SHFQ7M4L6 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC5.4□□□□□ -1.54
SHFQ7M4L6 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC5.4□□□□□ -1.54
SHFQ7M4L6 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SHFQ7M4L6 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC5.4□□□□□ -1.54
SHFQ7M4L6 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
SHFQ7M4L6 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.4□□□□□ -1.54
SHFQ7M4L6 DPPA3P2-202ENST00000557188 1219 ntBASIC5.4□□□□□ -1.54
SHFQ7M4L6 HMGN2P47-201ENST00000559378 272 ntBASIC5.4□□□□□ -1.54
SHFQ7M4L6 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.4□□□□□ -1.54
SHFQ7M4L6 AC010487.1-201ENST00000594408 1172 ntBASIC5.4□□□□□ -1.54
SHFQ7M4L6 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.4□□□□□ -1.54
SHFQ7M4L6 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.4□□□□□ -1.54
SHFQ7M4L6 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC5.4□□□□□ -1.54
SHFQ7M4L6 AC018645.2-201ENST00000609151 472 ntBASIC5.4□□□□□ -1.54
SHFQ7M4L6 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.4□□□□□ -1.54
SHFQ7M4L6 AC068726.1-201ENST00000610993 341 ntBASIC5.4□□□□□ -1.54
SHFQ7M4L6 AC025016.1-201ENST00000616746 682 ntBASIC5.4□□□□□ -1.54
SHFQ7M4L6 AC097460.3-201ENST00000623099 442 ntBASIC5.4□□□□□ -1.54
SHFQ7M4L6 SNX18P12-201ENST00000624821 759 ntBASIC5.4□□□□□ -1.54
SHFQ7M4L6 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.4□□□□□ -1.54
SHFQ7M4L6 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SHFQ7M4L6 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.4□□□□□ -1.54
SHFQ7M4L6 AC022325.1-201ENST00000502748 2199 ntBASIC5.4□□□□□ -1.55
SHFQ7M4L6 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SHFQ7M4L6 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SHFQ7M4L6 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.4□□□□□ -1.55
SHFQ7M4L6 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.4□□□□□ -1.55
SHFQ7M4L6 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
SHFQ7M4L6 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SHFQ7M4L6 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SHFQ7M4L6 AC010266.2-201ENST00000564741 3255 ntBASIC5.4□□□□□ -1.55
SHFQ7M4L6 AC011416.1-201ENST00000514947 1732 ntBASIC5.4□□□□□ -1.55
SHFQ7M4L6 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SHFQ7M4L6 THAP12P9-201ENST00000503971 2360 ntBASIC5.4□□□□□ -1.55
SHFQ7M4L6 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
SHFQ7M4L6 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
SHFQ7M4L6 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
SHFQ7M4L6 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SHFQ7M4L6 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
SHFQ7M4L6 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SHFQ7M4L6 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.39□□□□□ -1.55
SHFQ7M4L6 AC018717.1-201ENST00000457712 1505 ntBASIC5.39□□□□□ -1.55
SHFQ7M4L6 AC119674.1-202ENST00000641333 1860 ntBASIC5.39□□□□□ -1.55
SHFQ7M4L6 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.39□□□□□ -1.55
SHFQ7M4L6 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.39□□□□□ -1.55
SHFQ7M4L6 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SHFQ7M4L6 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.39□□□□□ -1.55
SHFQ7M4L6 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.39□□□□□ -1.55
SHFQ7M4L6 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SHFQ7M4L6 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC5.39□□□□□ -1.55
SHFQ7M4L6 OR10R3P-201ENST00000361688 942 ntBASIC5.39□□□□□ -1.55
SHFQ7M4L6 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SHFQ7M4L6 UQCRFS1P3-201ENST00000407697 385 ntBASIC5.39□□□□□ -1.55
SHFQ7M4L6 RPS7P8-201ENST00000418311 581 ntBASIC5.39□□□□□ -1.55
SHFQ7M4L6 MTCO1P51-201ENST00000427672 1060 ntBASIC5.39□□□□□ -1.55
SHFQ7M4L6 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.39□□□□□ -1.55
SHFQ7M4L6 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
SHFQ7M4L6 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.39□□□□□ -1.55
SHFQ7M4L6 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC5.39□□□□□ -1.55
SHFQ7M4L6 ELOCP3-201ENST00000439303 348 ntBASIC5.39□□□□□ -1.55
SHFQ7M4L6 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.39□□□□□ -1.55
SHFQ7M4L6 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.39□□□□□ -1.55
SHFQ7M4L6 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.39□□□□□ -1.55
SHFQ7M4L6 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC5.39□□□□□ -1.55
SHFQ7M4L6 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SHFQ7M4L6 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.39□□□□□ -1.55
SHFQ7M4L6 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SHFQ7M4L6 AC093663.2-201ENST00000484625 313 ntBASIC5.39□□□□□ -1.55
SHFQ7M4L6 AC012123.2-201ENST00000485809 248 ntBASIC5.39□□□□□ -1.55
SHFQ7M4L6 AC067904.2-201ENST00000517322 1283 ntBASIC5.39□□□□□ -1.55
SHFQ7M4L6 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.39□□□□□ -1.55
SHFQ7M4L6 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC5.39□□□□□ -1.55
SHFQ7M4L6 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.39□□□□□ -1.55
SHFQ7M4L6 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.39□□□□□ -1.55
SHFQ7M4L6 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
SHFQ7M4L6 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.39□□□□□ -1.55
SHFQ7M4L6 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.39□□□□□ -1.55
SHFQ7M4L6 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.39□□□□□ -1.55
SHFQ7M4L6 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC5.39□□□□□ -1.55
SHFQ7M4L6 AC027216.1-201ENST00000577726 685 ntBASIC5.39□□□□□ -1.55
SHFQ7M4L6 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.39□□□□□ -1.55
SHFQ7M4L6 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.39□□□□□ -1.55
SHFQ7M4L6 MIR6883-201ENST00000614952 78 ntBASIC5.39□□□□□ -1.55
SHFQ7M4L6 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.39□□□□□ -1.55
SHFQ7M4L6 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
SHFQ7M4L6 AP001002.2-201ENST00000625137 386 ntBASIC5.39□□□□□ -1.55
SHFQ7M4L6 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.39□□□□□ -1.55
SHFQ7M4L6 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC5.39□□□□□ -1.55
SHFQ7M4L6 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
SHFQ7M4L6 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SHFQ7M4L6 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.39□□□□□ -1.55
SHFQ7M4L6 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.39□□□□□ -1.55
SHFQ7M4L6 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 134.8 ms