Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC6.29□□□□□ -1.4
GFRA1P56159 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC6.29□□□□□ -1.4
GFRA1P56159 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
GFRA1P56159 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC6.29□□□□□ -1.4
GFRA1P56159 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC6.29□□□□□ -1.4
GFRA1P56159 AC023827.2-201ENST00000566880 1061 ntBASIC6.29□□□□□ -1.4
GFRA1P56159 MIR4666A-201ENST00000580160 79 ntBASIC6.29□□□□□ -1.4
GFRA1P56159 RSL24D1P11-201ENST00000591045 491 ntBASIC6.29□□□□□ -1.4
GFRA1P56159 AC010463.3-201ENST00000594077 500 ntBASIC6.29□□□□□ -1.4
GFRA1P56159 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC6.29□□□□□ -1.4
GFRA1P56159 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC6.29□□□□□ -1.4
GFRA1P56159 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC6.29□□□□□ -1.4
GFRA1P56159 AC008443.7-201ENST00000622195 246 ntBASIC6.29□□□□□ -1.4
GFRA1P56159 AC006840.1-201ENST00000623069 542 ntBASIC6.29□□□□□ -1.4
GFRA1P56159 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
GFRA1P56159 AC011471.4-201ENST00000638271 216 ntBASIC6.29□□□□□ -1.4
GFRA1P56159 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC6.29□□□□□ -1.4
GFRA1P56159 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
GFRA1P56159 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
GFRA1P56159 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
GFRA1P56159 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
GFRA1P56159 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC6.29□□□□□ -1.4
GFRA1P56159 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
GFRA1P56159 AC129502.1-201ENST00000623261 1654 ntBASIC6.29□□□□□ -1.4
GFRA1P56159 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC6.29□□□□□ -1.4
GFRA1P56159 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.29□□□□□ -1.4
GFRA1P56159 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC6.29□□□□□ -1.4
GFRA1P56159 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
GFRA1P56159 AC025263.3-201ENST00000622965 1396 ntBASIC6.29□□□□□ -1.4
GFRA1P56159 AC104162.1-201ENST00000430831 2382 ntBASIC6.29□□□□□ -1.4
GFRA1P56159 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
GFRA1P56159 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC6.29□□□□□ -1.4
GFRA1P56159 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
GFRA1P56159 AL355852.1-201ENST00000454081 1771 ntBASIC6.29□□□□□ -1.4
GFRA1P56159 AL137100.1-201ENST00000556703 1620 ntBASIC6.28□□□□□ -1.4
GFRA1P56159 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
GFRA1P56159 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
GFRA1P56159 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
GFRA1P56159 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
GFRA1P56159 UG0898H09-202ENST00000623646 7040 ntBASIC6.28□□□□□ -1.4
GFRA1P56159 AL359091.1-201ENST00000449048 1734 ntBASIC6.28□□□□□ -1.4
GFRA1P56159 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC6.28□□□□□ -1.4
GFRA1P56159 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC6.28□□□□□ -1.4
GFRA1P56159 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
GFRA1P56159 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
GFRA1P56159 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
GFRA1P56159 TLR10-202ENST00000361424 3484 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
GFRA1P56159 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
GFRA1P56159 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
GFRA1P56159 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC6.28□□□□□ -1.4
GFRA1P56159 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
GFRA1P56159 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC6.28□□□□□ -1.4
GFRA1P56159 NBPF8-201ENST00000583271 5330 ntBASIC6.28□□□□□ -1.4
GFRA1P56159 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC6.28□□□□□ -1.4
GFRA1P56159 RNU6-931P-201ENST00000363850 107 ntBASIC6.28□□□□□ -1.4
GFRA1P56159 OR5H15-201ENST00000383696 930 ntBASIC6.28□□□□□ -1.4
GFRA1P56159 IL6-203ENST00000401651 539 ntTSL 2 BASIC6.28□□□□□ -1.4
GFRA1P56159 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC6.28□□□□□ -1.4
GFRA1P56159 AL049697.3-201ENST00000406493 982 ntBASIC6.28□□□□□ -1.4
GFRA1P56159 RN7SKP232-201ENST00000410170 290 ntBASIC6.28□□□□□ -1.4
GFRA1P56159 AC004022.2-201ENST00000413824 193 ntBASIC6.28□□□□□ -1.4
GFRA1P56159 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC6.28□□□□□ -1.4
GFRA1P56159 P2RY10P2-201ENST00000416730 913 ntBASIC6.28□□□□□ -1.4
GFRA1P56159 RPL18AP14-201ENST00000417685 526 ntBASIC6.28□□□□□ -1.4
GFRA1P56159 EIF4A1P2-201ENST00000422633 1220 ntBASIC6.28□□□□□ -1.4
GFRA1P56159 OR6K4P-201ENST00000423179 955 ntBASIC6.28□□□□□ -1.4
GFRA1P56159 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC6.28□□□□□ -1.4
GFRA1P56159 HMGB1P45-201ENST00000435986 653 ntBASIC6.28□□□□□ -1.4
GFRA1P56159 AC009263.1-201ENST00000441193 1239 ntBASIC6.28□□□□□ -1.4
GFRA1P56159 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC6.28□□□□□ -1.4
GFRA1P56159 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC6.28□□□□□ -1.4
GFRA1P56159 AL034399.1-201ENST00000451535 380 ntBASIC6.28□□□□□ -1.4
GFRA1P56159 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC6.28□□□□□ -1.4
GFRA1P56159 DNAJC19P8-201ENST00000452887 259 ntBASIC6.28□□□□□ -1.4
GFRA1P56159 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC6.28□□□□□ -1.4
GFRA1P56159 RN7SL492P-201ENST00000460700 295 ntBASIC6.28□□□□□ -1.4
GFRA1P56159 AC104689.1-201ENST00000473356 768 ntBASIC6.28□□□□□ -1.4
GFRA1P56159 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC6.28□□□□□ -1.4
GFRA1P56159 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC6.28□□□□□ -1.4
GFRA1P56159 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC6.28□□□□□ -1.4
GFRA1P56159 AC112225.1-201ENST00000508230 297 ntBASIC6.28□□□□□ -1.4
GFRA1P56159 RNU6-678P-201ENST00000516832 109 ntBASIC6.28□□□□□ -1.4
GFRA1P56159 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC6.28□□□□□ -1.4
GFRA1P56159 AC060788.1-201ENST00000521318 469 ntBASIC6.28□□□□□ -1.4
GFRA1P56159 AC084337.1-201ENST00000524809 686 ntBASIC6.28□□□□□ -1.4
GFRA1P56159 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
GFRA1P56159 OR5AZ1P-201ENST00000527448 943 ntBASIC6.28□□□□□ -1.4
GFRA1P56159 HPS5-207ENST00000537258 1275 ntTSL 5 BASIC6.28□□□□□ -1.4
GFRA1P56159 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC6.28□□□□□ -1.4
GFRA1P56159 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC6.28□□□□□ -1.4
GFRA1P56159 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC6.28□□□□□ -1.4
GFRA1P56159 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.28□□□□□ -1.4
GFRA1P56159 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC6.28□□□□□ -1.4
GFRA1P56159 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
GFRA1P56159 ULK4P1-202ENST00000565174 503 ntBASIC6.28□□□□□ -1.4
GFRA1P56159 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC6.28□□□□□ -1.4
GFRA1P56159 MIR548Y-201ENST00000582739 110 ntBASIC6.28□□□□□ -1.4
GFRA1P56159 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC6.28□□□□□ -1.4
GFRA1P56159 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC6.28□□□□□ -1.4
GFRA1P56159 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms