Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 GAPDHP71-201ENST00000511530 1003 ntBASIC5.01□□□□□ -1.61
USF1P22415 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.01□□□□□ -1.61
USF1P22415 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.01□□□□□ -1.61
USF1P22415 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.01□□□□□ -1.61
USF1P22415 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC5.01□□□□□ -1.61
USF1P22415 AC051619.2-201ENST00000559063 397 ntBASIC5.01□□□□□ -1.61
USF1P22415 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.01□□□□□ -1.61
USF1P22415 MIR3176-201ENST00000582210 90 ntBASIC5.01□□□□□ -1.61
USF1P22415 AL360012.1-201ENST00000602813 131 ntBASIC5.01□□□□□ -1.61
USF1P22415 AC013244.1-201ENST00000604279 193 ntBASIC5.01□□□□□ -1.61
USF1P22415 AL021918.2-201ENST00000613415 194 ntBASIC5.01□□□□□ -1.61
USF1P22415 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.01□□□□□ -1.61
USF1P22415 AC020763.5-201ENST00000623298 430 ntBASIC5.01□□□□□ -1.61
USF1P22415 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC5.01□□□□□ -1.61
USF1P22415 AL691477.1-201ENST00000624398 162 ntBASIC5.01□□□□□ -1.61
USF1P22415 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.01□□□□□ -1.61
USF1P22415 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
USF1P22415 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.01□□□□□ -1.61
USF1P22415 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
USF1P22415 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
USF1P22415 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
USF1P22415 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
USF1P22415 HDAC1P2-201ENST00000453661 1398 ntBASIC5.01□□□□□ -1.61
USF1P22415 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
USF1P22415 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
USF1P22415 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
USF1P22415 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
USF1P22415 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
USF1P22415 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
USF1P22415 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5□□□□□ -1.61
USF1P22415 AC027279.1-201ENST00000568885 4284 ntBASIC5□□□□□ -1.61
USF1P22415 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
USF1P22415 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5□□□□□ -1.61
USF1P22415 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
USF1P22415 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
USF1P22415 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5□□□□□ -1.61
USF1P22415 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
USF1P22415 BCORP1-203ENST00000513194 5093 ntBASIC5□□□□□ -1.61
USF1P22415 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5□□□□□ -1.61
USF1P22415 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5□□□□□ -1.61
USF1P22415 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
USF1P22415 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
USF1P22415 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
USF1P22415 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5□□□□□ -1.61
USF1P22415 RNA5-8SP5-201ENST00000365304 152 ntBASIC5□□□□□ -1.61
USF1P22415 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
USF1P22415 NACAP7-201ENST00000407371 609 ntBASIC5□□□□□ -1.61
USF1P22415 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5□□□□□ -1.61
USF1P22415 OR3A2-201ENST00000408891 1076 ntBASIC5□□□□□ -1.61
USF1P22415 RPS26P38-201ENST00000414476 348 ntBASIC5□□□□□ -1.61
USF1P22415 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5□□□□□ -1.61
USF1P22415 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5□□□□□ -1.61
USF1P22415 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5□□□□□ -1.61
USF1P22415 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5□□□□□ -1.61
USF1P22415 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5□□□□□ -1.61
USF1P22415 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC5□□□□□ -1.61
USF1P22415 AP000281.1-201ENST00000444036 316 ntBASIC5□□□□□ -1.61
USF1P22415 AL445687.2-201ENST00000458156 728 ntBASIC5□□□□□ -1.61
USF1P22415 RN7SL284P-201ENST00000498823 275 ntBASIC5□□□□□ -1.61
USF1P22415 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5□□□□□ -1.61
USF1P22415 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5□□□□□ -1.61
USF1P22415 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5□□□□□ -1.61
USF1P22415 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5□□□□□ -1.61
USF1P22415 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5□□□□□ -1.61
USF1P22415 IGLV2-28-201ENST00000520681 304 ntBASIC5□□□□□ -1.61
USF1P22415 AC008429.4-201ENST00000521201 182 ntBASIC5□□□□□ -1.61
USF1P22415 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5□□□□□ -1.61
USF1P22415 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5□□□□□ -1.61
USF1P22415 AC006530.1-201ENST00000555980 571 ntBASIC5□□□□□ -1.61
USF1P22415 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5□□□□□ -1.61
USF1P22415 AC027334.1-201ENST00000603257 310 ntBASIC5□□□□□ -1.61
USF1P22415 AC119501.1-201ENST00000603646 475 ntBASIC5□□□□□ -1.61
USF1P22415 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5□□□□□ -1.61
USF1P22415 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC5□□□□□ -1.61
USF1P22415 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5□□□□□ -1.61
USF1P22415 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5□□□□□ -1.61
USF1P22415 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
USF1P22415 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5□□□□□ -1.61
USF1P22415 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5□□□□□ -1.61
USF1P22415 AC114876.1-201ENST00000490962 1366 ntBASIC5□□□□□ -1.61
USF1P22415 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
USF1P22415 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
USF1P22415 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
USF1P22415 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
USF1P22415 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
USF1P22415 PARP4P2-201ENST00000446672 3326 ntBASIC4.99□□□□□ -1.61
USF1P22415 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
USF1P22415 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
USF1P22415 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
USF1P22415 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
USF1P22415 SELENOWP1-201ENST00000322792 252 ntBASIC4.99□□□□□ -1.61
USF1P22415 OR10R3P-201ENST00000361688 942 ntBASIC4.99□□□□□ -1.61
USF1P22415 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC4.99□□□□□ -1.61
USF1P22415 AK4P4-201ENST00000419465 646 ntBASIC4.99□□□□□ -1.61
USF1P22415 AC093155.2-201ENST00000420734 937 ntBASIC4.99□□□□□ -1.61
USF1P22415 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC4.99□□□□□ -1.61
USF1P22415 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.99□□□□□ -1.61
USF1P22415 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC4.99□□□□□ -1.61
USF1P22415 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC4.99□□□□□ -1.61
USF1P22415 AC112187.1-201ENST00000455837 479 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms