Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.46□□□□□ -1.37
FOXN3O00409 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.46□□□□□ -1.37
FOXN3O00409 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC6.46□□□□□ -1.37
FOXN3O00409 MTCO1P28-201ENST00000574177 1528 ntBASIC6.46□□□□□ -1.37
FOXN3O00409 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
FOXN3O00409 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC6.46□□□□□ -1.37
FOXN3O00409 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.37
FOXN3O00409 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.46□□□□□ -1.38
FOXN3O00409 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.46□□□□□ -1.38
FOXN3O00409 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
FOXN3O00409 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
FOXN3O00409 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
FOXN3O00409 AP000568.1-201ENST00000282964 442 ntBASIC6.46□□□□□ -1.38
FOXN3O00409 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
FOXN3O00409 RNU1-134P-201ENST00000362935 165 ntBASIC6.46□□□□□ -1.38
FOXN3O00409 RNA5SP279-201ENST00000365513 117 ntBASIC6.46□□□□□ -1.38
FOXN3O00409 AL132875.1-201ENST00000403623 949 ntBASIC6.46□□□□□ -1.38
FOXN3O00409 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.46□□□□□ -1.38
FOXN3O00409 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.46□□□□□ -1.38
FOXN3O00409 PRUNEP1-201ENST00000425846 705 ntBASIC6.46□□□□□ -1.38
FOXN3O00409 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.46□□□□□ -1.38
FOXN3O00409 USP24P1-201ENST00000433802 779 ntBASIC6.46□□□□□ -1.38
FOXN3O00409 Z84478.1-201ENST00000438230 1219 ntBASIC6.46□□□□□ -1.38
FOXN3O00409 AL390879.1-201ENST00000439143 386 ntBASIC6.46□□□□□ -1.38
FOXN3O00409 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
FOXN3O00409 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC6.46□□□□□ -1.38
FOXN3O00409 AC091544.1-201ENST00000484702 348 ntBASIC6.46□□□□□ -1.38
FOXN3O00409 AP002453.1-201ENST00000492327 668 ntBASIC6.46□□□□□ -1.38
FOXN3O00409 AC112484.3-201ENST00000505910 329 ntBASIC6.46□□□□□ -1.38
FOXN3O00409 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC6.46□□□□□ -1.38
FOXN3O00409 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC6.46□□□□□ -1.38
FOXN3O00409 TOMM22P4-201ENST00000511318 336 ntBASIC6.46□□□□□ -1.38
FOXN3O00409 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
FOXN3O00409 AC010374.2-201ENST00000512933 535 ntBASIC6.46□□□□□ -1.38
FOXN3O00409 AC103833.1-201ENST00000517442 172 ntBASIC6.46□□□□□ -1.38
FOXN3O00409 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.46□□□□□ -1.38
FOXN3O00409 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.46□□□□□ -1.38
FOXN3O00409 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC6.46□□□□□ -1.38
FOXN3O00409 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6.46□□□□□ -1.38
FOXN3O00409 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC6.46□□□□□ -1.38
FOXN3O00409 AC121758.1-202ENST00000556917 658 ntBASIC6.46□□□□□ -1.38
FOXN3O00409 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.46□□□□□ -1.38
FOXN3O00409 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.46□□□□□ -1.38
FOXN3O00409 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.46□□□□□ -1.38
FOXN3O00409 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.46□□□□□ -1.38
FOXN3O00409 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.46□□□□□ -1.38
FOXN3O00409 BMS1P7-201ENST00000602440 1052 ntBASIC6.46□□□□□ -1.38
FOXN3O00409 uc_338.31-201ENST00000615595 186 ntBASIC6.46□□□□□ -1.38
FOXN3O00409 AL512652.1-201ENST00000619006 500 ntBASIC6.46□□□□□ -1.38
FOXN3O00409 REV3L-214ENST00000619481 969 ntTSL 5 BASIC6.46□□□□□ -1.38
FOXN3O00409 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC6.46□□□□□ -1.38
FOXN3O00409 AC099654.15-201ENST00000639802 509 ntBASIC6.46□□□□□ -1.38
FOXN3O00409 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
FOXN3O00409 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.46□□□□□ -1.38
FOXN3O00409 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
FOXN3O00409 AC083837.1-201ENST00000565297 2994 ntBASIC6.46□□□□□ -1.38
FOXN3O00409 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
FOXN3O00409 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
FOXN3O00409 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.46□□□□□ -1.38
FOXN3O00409 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
FOXN3O00409 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.46□□□□□ -1.38
FOXN3O00409 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
FOXN3O00409 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
FOXN3O00409 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.46□□□□□ -1.38
FOXN3O00409 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.46□□□□□ -1.38
FOXN3O00409 FGG-201ENST00000336098 1659 ntTSL 2 BASIC6.45□□□□□ -1.38
FOXN3O00409 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
FOXN3O00409 RBMY1HP-201ENST00000382759 1389 ntBASIC6.45□□□□□ -1.38
FOXN3O00409 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.45□□□□□ -1.38
FOXN3O00409 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.45□□□□□ -1.38
FOXN3O00409 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
FOXN3O00409 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
FOXN3O00409 OR10R3P-201ENST00000361688 942 ntBASIC6.45□□□□□ -1.38
FOXN3O00409 SNORD1C-201ENST00000363315 78 ntBASIC6.45□□□□□ -1.38
FOXN3O00409 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC6.45□□□□□ -1.38
FOXN3O00409 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.45□□□□□ -1.38
FOXN3O00409 OR5W1P-201ENST00000423705 938 ntBASIC6.45□□□□□ -1.38
FOXN3O00409 RPL12P12-201ENST00000424633 501 ntBASIC6.45□□□□□ -1.38
FOXN3O00409 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.45□□□□□ -1.38
FOXN3O00409 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
FOXN3O00409 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC6.45□□□□□ -1.38
FOXN3O00409 AC092651.1-201ENST00000426110 312 ntBASIC6.45□□□□□ -1.38
FOXN3O00409 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.45□□□□□ -1.38
FOXN3O00409 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC6.45□□□□□ -1.38
FOXN3O00409 FTLP8-201ENST00000446770 267 ntBASIC6.45□□□□□ -1.38
FOXN3O00409 AC016027.4-201ENST00000450866 277 ntBASIC6.45□□□□□ -1.38
FOXN3O00409 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC6.45□□□□□ -1.38
FOXN3O00409 PPIAP7-201ENST00000454070 489 ntBASIC6.45□□□□□ -1.38
FOXN3O00409 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC6.45□□□□□ -1.38
FOXN3O00409 RN7SL568P-201ENST00000493069 298 ntBASIC6.45□□□□□ -1.38
FOXN3O00409 MTCO2P9-201ENST00000503214 694 ntBASIC6.45□□□□□ -1.38
FOXN3O00409 AC108103.1-201ENST00000511286 446 ntBASIC6.45□□□□□ -1.38
FOXN3O00409 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC6.45□□□□□ -1.38
FOXN3O00409 OR56A7P-201ENST00000524865 941 ntBASIC6.45□□□□□ -1.38
FOXN3O00409 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC6.45□□□□□ -1.38
FOXN3O00409 AP000620.1-201ENST00000527147 504 ntBASIC6.45□□□□□ -1.38
FOXN3O00409 AP003033.2-201ENST00000528901 805 ntBASIC6.45□□□□□ -1.38
FOXN3O00409 AP000619.2-201ENST00000546014 969 ntBASIC6.45□□□□□ -1.38
FOXN3O00409 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC6.45□□□□□ -1.38
FOXN3O00409 AC233266.2-201ENST00000567067 528 ntBASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 164.9 ms