Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn3Q9Z0G9 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn3Q9Z0G9 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn3Q9Z0G9 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn3Q9Z0G9 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Cldn3Q9Z0G9 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn3Q9Z0G9 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn3Q9Z0G9 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn3Q9Z0G9 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn3Q9Z0G9 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn3Q9Z0G9 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn3Q9Z0G9 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cldn3Q9Z0G9 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cldn3Q9Z0G9 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cldn3Q9Z0G9 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Cldn3Q9Z0G9 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cldn3Q9Z0G9 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cldn3Q9Z0G9 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.11■□□□□ 0.33
Cldn3Q9Z0G9 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.11■□□□□ 0.33
Cldn3Q9Z0G9 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.11■□□□□ 0.33
Cldn3Q9Z0G9 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cldn3Q9Z0G9 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cldn3Q9Z0G9 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.11■□□□□ 0.33
Cldn3Q9Z0G9 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cldn3Q9Z0G9 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.11■□□□□ 0.33
Cldn3Q9Z0G9 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Cldn3Q9Z0G9 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cldn3Q9Z0G9 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cldn3Q9Z0G9 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cldn3Q9Z0G9 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Cldn3Q9Z0G9 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cldn3Q9Z0G9 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cldn3Q9Z0G9 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Cldn3Q9Z0G9 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cldn3Q9Z0G9 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cldn3Q9Z0G9 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cldn3Q9Z0G9 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Cldn3Q9Z0G9 Gm18958-201ENSMUST00000174258 762 ntBASIC17.1■□□□□ 0.33
Cldn3Q9Z0G9 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.1■□□□□ 0.33
Cldn3Q9Z0G9 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.1■□□□□ 0.33
Cldn3Q9Z0G9 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cldn3Q9Z0G9 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cldn3Q9Z0G9 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Cldn3Q9Z0G9 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Cldn3Q9Z0G9 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cldn3Q9Z0G9 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cldn3Q9Z0G9 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cldn3Q9Z0G9 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cldn3Q9Z0G9 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cldn3Q9Z0G9 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.09■□□□□ 0.33
Cldn3Q9Z0G9 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cldn3Q9Z0G9 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Cldn3Q9Z0G9 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Cldn3Q9Z0G9 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cldn3Q9Z0G9 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.09■□□□□ 0.33
Cldn3Q9Z0G9 Gm11539-201ENSMUST00000119837 557 ntBASIC17.09■□□□□ 0.33
Cldn3Q9Z0G9 Gm13436-201ENSMUST00000120418 567 ntBASIC17.09■□□□□ 0.33
Cldn3Q9Z0G9 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Cldn3Q9Z0G9 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Cldn3Q9Z0G9 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cldn3Q9Z0G9 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cldn3Q9Z0G9 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cldn3Q9Z0G9 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cldn3Q9Z0G9 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cldn3Q9Z0G9 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cldn3Q9Z0G9 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.09■□□□□ 0.33
Cldn3Q9Z0G9 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cldn3Q9Z0G9 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cldn3Q9Z0G9 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.09■□□□□ 0.33
Cldn3Q9Z0G9 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cldn3Q9Z0G9 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cldn3Q9Z0G9 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Cldn3Q9Z0G9 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.33
Cldn3Q9Z0G9 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.08■□□□□ 0.33
Cldn3Q9Z0G9 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cldn3Q9Z0G9 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cldn3Q9Z0G9 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cldn3Q9Z0G9 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.08■□□□□ 0.32
Cldn3Q9Z0G9 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cldn3Q9Z0G9 Gm2274-201ENSMUST00000184539 609 ntBASIC17.08■□□□□ 0.32
Cldn3Q9Z0G9 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cldn3Q9Z0G9 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cldn3Q9Z0G9 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cldn3Q9Z0G9 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cldn3Q9Z0G9 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cldn3Q9Z0G9 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cldn3Q9Z0G9 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.08■□□□□ 0.32
Cldn3Q9Z0G9 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cldn3Q9Z0G9 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cldn3Q9Z0G9 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cldn3Q9Z0G9 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Cldn3Q9Z0G9 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cldn3Q9Z0G9 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cldn3Q9Z0G9 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cldn3Q9Z0G9 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cldn3Q9Z0G9 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cldn3Q9Z0G9 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cldn3Q9Z0G9 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cldn3Q9Z0G9 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cldn3Q9Z0G9 Gm13559-201ENSMUST00000120476 863 ntBASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms