Protein–RNA interactions for Protein: Q9ES97

Rtn3, Reticulon-3, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3Q9ES97 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Rtn3Q9ES97 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Rtn3Q9ES97 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.01■□□□□ 0.47
Rtn3Q9ES97 Gm7977-201ENSMUST00000193787 748 ntBASIC18.01■□□□□ 0.47
Rtn3Q9ES97 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.01■□□□□ 0.47
Rtn3Q9ES97 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rtn3Q9ES97 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rtn3Q9ES97 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rtn3Q9ES97 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rtn3Q9ES97 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rtn3Q9ES97 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rtn3Q9ES97 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rtn3Q9ES97 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rtn3Q9ES97 Gm11841-201ENSMUST00000117060 1963 ntBASIC18■□□□□ 0.47
Rtn3Q9ES97 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Rtn3Q9ES97 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Rtn3Q9ES97 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rtn3Q9ES97 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rtn3Q9ES97 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rtn3Q9ES97 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Rtn3Q9ES97 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18■□□□□ 0.47
Rtn3Q9ES97 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rtn3Q9ES97 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18■□□□□ 0.47
Rtn3Q9ES97 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rtn3Q9ES97 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rtn3Q9ES97 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Rtn3Q9ES97 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18■□□□□ 0.47
Rtn3Q9ES97 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rtn3Q9ES97 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
Rtn3Q9ES97 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Rtn3Q9ES97 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Rtn3Q9ES97 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rtn3Q9ES97 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rtn3Q9ES97 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rtn3Q9ES97 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.99■□□□□ 0.47
Rtn3Q9ES97 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rtn3Q9ES97 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.99■□□□□ 0.47
Rtn3Q9ES97 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rtn3Q9ES97 Gm3375-201ENSMUST00000203929 796 ntBASIC17.99■□□□□ 0.47
Rtn3Q9ES97 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rtn3Q9ES97 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rtn3Q9ES97 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rtn3Q9ES97 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rtn3Q9ES97 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rtn3Q9ES97 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
Rtn3Q9ES97 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Rtn3Q9ES97 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rtn3Q9ES97 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rtn3Q9ES97 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rtn3Q9ES97 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.98■□□□□ 0.47
Rtn3Q9ES97 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rtn3Q9ES97 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rtn3Q9ES97 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Rtn3Q9ES97 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rtn3Q9ES97 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rtn3Q9ES97 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rtn3Q9ES97 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rtn3Q9ES97 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rtn3Q9ES97 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rtn3Q9ES97 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rtn3Q9ES97 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rtn3Q9ES97 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.98■□□□□ 0.47
Rtn3Q9ES97 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.98■□□□□ 0.47
Rtn3Q9ES97 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.98■□□□□ 0.47
Rtn3Q9ES97 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rtn3Q9ES97 Gm43799-201ENSMUST00000201845 579 ntBASIC17.98■□□□□ 0.47
Rtn3Q9ES97 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.98■□□□□ 0.47
Rtn3Q9ES97 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rtn3Q9ES97 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rtn3Q9ES97 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rtn3Q9ES97 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rtn3Q9ES97 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rtn3Q9ES97 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rtn3Q9ES97 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rtn3Q9ES97 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Rtn3Q9ES97 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rtn3Q9ES97 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Rtn3Q9ES97 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rtn3Q9ES97 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rtn3Q9ES97 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rtn3Q9ES97 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rtn3Q9ES97 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rtn3Q9ES97 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rtn3Q9ES97 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rtn3Q9ES97 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.97■□□□□ 0.47
Rtn3Q9ES97 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.97■□□□□ 0.47
Rtn3Q9ES97 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rtn3Q9ES97 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Rtn3Q9ES97 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rtn3Q9ES97 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rtn3Q9ES97 Gm9987-201ENSMUST00000069768 567 ntBASIC17.97■□□□□ 0.47
Rtn3Q9ES97 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rtn3Q9ES97 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rtn3Q9ES97 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rtn3Q9ES97 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rtn3Q9ES97 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.97■□□□□ 0.47
Rtn3Q9ES97 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rtn3Q9ES97 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.97■□□□□ 0.47
Rtn3Q9ES97 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rtn3Q9ES97 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms