Protein–RNA interactions for Protein: Q9ES64

Ush1c, Harmonin, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1cQ9ES64 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ush1cQ9ES64 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ush1cQ9ES64 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ush1cQ9ES64 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Ush1cQ9ES64 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ush1cQ9ES64 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ush1cQ9ES64 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Ush1cQ9ES64 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Ush1cQ9ES64 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
Ush1cQ9ES64 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Ush1cQ9ES64 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ush1cQ9ES64 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC19.41■□□□□ 0.7
Ush1cQ9ES64 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
Ush1cQ9ES64 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Ush1cQ9ES64 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ush1cQ9ES64 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ush1cQ9ES64 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ush1cQ9ES64 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ush1cQ9ES64 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ush1cQ9ES64 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ush1cQ9ES64 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
Ush1cQ9ES64 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ush1cQ9ES64 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ush1cQ9ES64 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.41■□□□□ 0.7
Ush1cQ9ES64 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ush1cQ9ES64 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC19.41■□□□□ 0.7
Ush1cQ9ES64 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Ush1cQ9ES64 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Ush1cQ9ES64 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ush1cQ9ES64 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC19.41■□□□□ 0.7
Ush1cQ9ES64 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ush1cQ9ES64 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ush1cQ9ES64 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ush1cQ9ES64 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ush1cQ9ES64 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ush1cQ9ES64 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ush1cQ9ES64 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ush1cQ9ES64 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ush1cQ9ES64 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ush1cQ9ES64 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.4■□□□□ 0.7
Ush1cQ9ES64 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ush1cQ9ES64 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ush1cQ9ES64 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ush1cQ9ES64 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ush1cQ9ES64 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ush1cQ9ES64 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ush1cQ9ES64 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ush1cQ9ES64 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.4■□□□□ 0.7
Ush1cQ9ES64 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ush1cQ9ES64 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Ush1cQ9ES64 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ush1cQ9ES64 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ush1cQ9ES64 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Ush1cQ9ES64 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC19.39■□□□□ 0.69
Ush1cQ9ES64 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Ush1cQ9ES64 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ush1cQ9ES64 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.39■□□□□ 0.69
Ush1cQ9ES64 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.39■□□□□ 0.69
Ush1cQ9ES64 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ush1cQ9ES64 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ush1cQ9ES64 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Ush1cQ9ES64 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Ush1cQ9ES64 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ush1cQ9ES64 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
Ush1cQ9ES64 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ush1cQ9ES64 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ush1cQ9ES64 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ush1cQ9ES64 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Ush1cQ9ES64 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ush1cQ9ES64 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ush1cQ9ES64 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ush1cQ9ES64 Gm14026-201ENSMUST00000120625 1789 ntBASIC19.38■□□□□ 0.69
Ush1cQ9ES64 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ush1cQ9ES64 Gm19430-201ENSMUST00000193847 2137 ntBASIC19.38■□□□□ 0.69
Ush1cQ9ES64 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC19.38■□□□□ 0.69
Ush1cQ9ES64 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ush1cQ9ES64 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.38■□□□□ 0.69
Ush1cQ9ES64 Gm7514-201ENSMUST00000209475 934 ntBASIC19.38■□□□□ 0.69
Ush1cQ9ES64 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ush1cQ9ES64 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ush1cQ9ES64 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ush1cQ9ES64 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ush1cQ9ES64 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ush1cQ9ES64 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Ush1cQ9ES64 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ush1cQ9ES64 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ush1cQ9ES64 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ush1cQ9ES64 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ush1cQ9ES64 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ush1cQ9ES64 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ush1cQ9ES64 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ush1cQ9ES64 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Ush1cQ9ES64 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ush1cQ9ES64 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ush1cQ9ES64 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ush1cQ9ES64 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ush1cQ9ES64 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ush1cQ9ES64 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ush1cQ9ES64 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Ush1cQ9ES64 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms