Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx2-4Q9EQM3 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nkx2-4Q9EQM3 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nkx2-4Q9EQM3 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Nkx2-4Q9EQM3 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Nkx2-4Q9EQM3 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Nkx2-4Q9EQM3 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nkx2-4Q9EQM3 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Nkx2-4Q9EQM3 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nkx2-4Q9EQM3 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC17.33■□□□□ 0.36
Nkx2-4Q9EQM3 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC17.33■□□□□ 0.36
Nkx2-4Q9EQM3 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nkx2-4Q9EQM3 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nkx2-4Q9EQM3 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nkx2-4Q9EQM3 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nkx2-4Q9EQM3 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nkx2-4Q9EQM3 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nkx2-4Q9EQM3 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.33■□□□□ 0.36
Nkx2-4Q9EQM3 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nkx2-4Q9EQM3 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nkx2-4Q9EQM3 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.32■□□□□ 0.36
Nkx2-4Q9EQM3 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Nkx2-4Q9EQM3 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx2-4Q9EQM3 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx2-4Q9EQM3 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx2-4Q9EQM3 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Nkx2-4Q9EQM3 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx2-4Q9EQM3 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx2-4Q9EQM3 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx2-4Q9EQM3 Gm4995-201ENSMUST00000117247 432 ntBASIC17.32■□□□□ 0.36
Nkx2-4Q9EQM3 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC17.32■□□□□ 0.36
Nkx2-4Q9EQM3 Gm14494-201ENSMUST00000118786 435 ntBASIC17.32■□□□□ 0.36
Nkx2-4Q9EQM3 Gm15173-201ENSMUST00000122049 433 ntBASIC17.32■□□□□ 0.36
Nkx2-4Q9EQM3 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC17.32■□□□□ 0.36
Nkx2-4Q9EQM3 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx2-4Q9EQM3 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx2-4Q9EQM3 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx2-4Q9EQM3 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.32■□□□□ 0.36
Nkx2-4Q9EQM3 AC225888.1-201ENSMUST00000227184 728 ntBASIC17.32■□□□□ 0.36
Nkx2-4Q9EQM3 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx2-4Q9EQM3 Gm15590-201ENSMUST00000078419 552 ntBASIC17.32■□□□□ 0.36
Nkx2-4Q9EQM3 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx2-4Q9EQM3 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx2-4Q9EQM3 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Nkx2-4Q9EQM3 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx2-4Q9EQM3 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx2-4Q9EQM3 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx2-4Q9EQM3 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx2-4Q9EQM3 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.32■□□□□ 0.36
Nkx2-4Q9EQM3 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx2-4Q9EQM3 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx2-4Q9EQM3 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx2-4Q9EQM3 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nkx2-4Q9EQM3 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nkx2-4Q9EQM3 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nkx2-4Q9EQM3 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
Nkx2-4Q9EQM3 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.31■□□□□ 0.36
Nkx2-4Q9EQM3 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nkx2-4Q9EQM3 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nkx2-4Q9EQM3 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Nkx2-4Q9EQM3 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nkx2-4Q9EQM3 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nkx2-4Q9EQM3 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC17.31■□□□□ 0.36
Nkx2-4Q9EQM3 Grk6-206ENSMUST00000224995 2971 ntBASIC17.31■□□□□ 0.36
Nkx2-4Q9EQM3 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nkx2-4Q9EQM3 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.31■□□□□ 0.36
Nkx2-4Q9EQM3 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nkx2-4Q9EQM3 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nkx2-4Q9EQM3 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nkx2-4Q9EQM3 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nkx2-4Q9EQM3 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Nkx2-4Q9EQM3 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nkx2-4Q9EQM3 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.3■□□□□ 0.36
Nkx2-4Q9EQM3 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nkx2-4Q9EQM3 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nkx2-4Q9EQM3 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nkx2-4Q9EQM3 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nkx2-4Q9EQM3 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nkx2-4Q9EQM3 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nkx2-4Q9EQM3 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Nkx2-4Q9EQM3 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nkx2-4Q9EQM3 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC17.3■□□□□ 0.36
Nkx2-4Q9EQM3 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.3■□□□□ 0.36
Nkx2-4Q9EQM3 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nkx2-4Q9EQM3 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC17.3■□□□□ 0.36
Nkx2-4Q9EQM3 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nkx2-4Q9EQM3 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.3■□□□□ 0.36
Nkx2-4Q9EQM3 AC154222.1-201ENSMUST00000223882 475 ntBASIC17.3■□□□□ 0.36
Nkx2-4Q9EQM3 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Nkx2-4Q9EQM3 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Nkx2-4Q9EQM3 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nkx2-4Q9EQM3 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nkx2-4Q9EQM3 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nkx2-4Q9EQM3 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Nkx2-4Q9EQM3 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Nkx2-4Q9EQM3 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.3■□□□□ 0.36
Nkx2-4Q9EQM3 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nkx2-4Q9EQM3 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nkx2-4Q9EQM3 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nkx2-4Q9EQM3 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms