Protein–RNA interactions for Protein: Q9D3I0

5530400C23Rik, RIKEN cDNA 5530400C23 gene, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
5530400C23RikQ9D3I0 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.61■□□□□ 0.25
5530400C23RikQ9D3I0 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
5530400C23RikQ9D3I0 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.61■□□□□ 0.25
5530400C23RikQ9D3I0 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
5530400C23RikQ9D3I0 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
5530400C23RikQ9D3I0 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
5530400C23RikQ9D3I0 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
5530400C23RikQ9D3I0 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
5530400C23RikQ9D3I0 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.61■□□□□ 0.25
5530400C23RikQ9D3I0 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
5530400C23RikQ9D3I0 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
5530400C23RikQ9D3I0 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
5530400C23RikQ9D3I0 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
5530400C23RikQ9D3I0 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
5530400C23RikQ9D3I0 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
5530400C23RikQ9D3I0 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.61■□□□□ 0.25
5530400C23RikQ9D3I0 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
5530400C23RikQ9D3I0 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
5530400C23RikQ9D3I0 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.61■□□□□ 0.25
5530400C23RikQ9D3I0 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
5530400C23RikQ9D3I0 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
5530400C23RikQ9D3I0 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
5530400C23RikQ9D3I0 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
5530400C23RikQ9D3I0 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
5530400C23RikQ9D3I0 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
5530400C23RikQ9D3I0 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
5530400C23RikQ9D3I0 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
5530400C23RikQ9D3I0 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
5530400C23RikQ9D3I0 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
5530400C23RikQ9D3I0 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
5530400C23RikQ9D3I0 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
5530400C23RikQ9D3I0 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.6■□□□□ 0.25
5530400C23RikQ9D3I0 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
5530400C23RikQ9D3I0 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
5530400C23RikQ9D3I0 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
5530400C23RikQ9D3I0 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.6■□□□□ 0.25
5530400C23RikQ9D3I0 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.6■□□□□ 0.25
5530400C23RikQ9D3I0 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
5530400C23RikQ9D3I0 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
5530400C23RikQ9D3I0 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.6■□□□□ 0.25
5530400C23RikQ9D3I0 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
5530400C23RikQ9D3I0 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
5530400C23RikQ9D3I0 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
5530400C23RikQ9D3I0 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
5530400C23RikQ9D3I0 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.6■□□□□ 0.25
5530400C23RikQ9D3I0 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
5530400C23RikQ9D3I0 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.6■□□□□ 0.25
5530400C23RikQ9D3I0 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
5530400C23RikQ9D3I0 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
5530400C23RikQ9D3I0 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
5530400C23RikQ9D3I0 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
5530400C23RikQ9D3I0 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
5530400C23RikQ9D3I0 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
5530400C23RikQ9D3I0 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
5530400C23RikQ9D3I0 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
5530400C23RikQ9D3I0 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
5530400C23RikQ9D3I0 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
5530400C23RikQ9D3I0 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
5530400C23RikQ9D3I0 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
5530400C23RikQ9D3I0 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
5530400C23RikQ9D3I0 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
5530400C23RikQ9D3I0 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
5530400C23RikQ9D3I0 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.59■□□□□ 0.25
5530400C23RikQ9D3I0 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.59■□□□□ 0.25
5530400C23RikQ9D3I0 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
5530400C23RikQ9D3I0 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
5530400C23RikQ9D3I0 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.59■□□□□ 0.25
5530400C23RikQ9D3I0 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
5530400C23RikQ9D3I0 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
5530400C23RikQ9D3I0 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
5530400C23RikQ9D3I0 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
5530400C23RikQ9D3I0 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.58■□□□□ 0.24
5530400C23RikQ9D3I0 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
5530400C23RikQ9D3I0 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.58■□□□□ 0.24
5530400C23RikQ9D3I0 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
5530400C23RikQ9D3I0 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
5530400C23RikQ9D3I0 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
5530400C23RikQ9D3I0 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
5530400C23RikQ9D3I0 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
5530400C23RikQ9D3I0 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
5530400C23RikQ9D3I0 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
5530400C23RikQ9D3I0 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
5530400C23RikQ9D3I0 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
5530400C23RikQ9D3I0 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
5530400C23RikQ9D3I0 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
5530400C23RikQ9D3I0 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
5530400C23RikQ9D3I0 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
5530400C23RikQ9D3I0 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
5530400C23RikQ9D3I0 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
5530400C23RikQ9D3I0 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
5530400C23RikQ9D3I0 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
5530400C23RikQ9D3I0 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
5530400C23RikQ9D3I0 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
5530400C23RikQ9D3I0 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
5530400C23RikQ9D3I0 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
5530400C23RikQ9D3I0 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
5530400C23RikQ9D3I0 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.57■□□□□ 0.24
5530400C23RikQ9D3I0 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.57■□□□□ 0.24
5530400C23RikQ9D3I0 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.57■□□□□ 0.24
5530400C23RikQ9D3I0 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms