Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim42Q9D2H5 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim42Q9D2H5 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC16.92■□□□□ 0.3
Trim42Q9D2H5 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trim42Q9D2H5 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim42Q9D2H5 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim42Q9D2H5 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trim42Q9D2H5 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
Trim42Q9D2H5 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC16.92■□□□□ 0.3
Trim42Q9D2H5 Ap3s1-204ENSMUST00000225520 957 ntBASIC16.92■□□□□ 0.3
Trim42Q9D2H5 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trim42Q9D2H5 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trim42Q9D2H5 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim42Q9D2H5 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trim42Q9D2H5 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim42Q9D2H5 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Trim42Q9D2H5 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim42Q9D2H5 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim42Q9D2H5 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.91■□□□□ 0.3
Trim42Q9D2H5 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim42Q9D2H5 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim42Q9D2H5 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.91■□□□□ 0.3
Trim42Q9D2H5 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
Trim42Q9D2H5 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim42Q9D2H5 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim42Q9D2H5 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim42Q9D2H5 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
Trim42Q9D2H5 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC16.91■□□□□ 0.3
Trim42Q9D2H5 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC16.91■□□□□ 0.3
Trim42Q9D2H5 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim42Q9D2H5 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim42Q9D2H5 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
Trim42Q9D2H5 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim42Q9D2H5 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Trim42Q9D2H5 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.91■□□□□ 0.3
Trim42Q9D2H5 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Trim42Q9D2H5 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim42Q9D2H5 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim42Q9D2H5 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim42Q9D2H5 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim42Q9D2H5 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim42Q9D2H5 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trim42Q9D2H5 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim42Q9D2H5 Gm2399-201ENSMUST00000104944 225 ntBASIC16.9■□□□□ 0.3
Trim42Q9D2H5 Gm7514-201ENSMUST00000209475 934 ntBASIC16.9■□□□□ 0.3
Trim42Q9D2H5 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim42Q9D2H5 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Trim42Q9D2H5 Zfp783-201ENSMUST00000095946 670 ntBASIC16.9■□□□□ 0.3
Trim42Q9D2H5 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Trim42Q9D2H5 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim42Q9D2H5 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trim42Q9D2H5 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim42Q9D2H5 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim42Q9D2H5 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trim42Q9D2H5 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim42Q9D2H5 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.9■□□□□ 0.3
Trim42Q9D2H5 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim42Q9D2H5 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim42Q9D2H5 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim42Q9D2H5 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim42Q9D2H5 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Trim42Q9D2H5 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC16.89■□□□□ 0.3
Trim42Q9D2H5 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
Trim42Q9D2H5 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trim42Q9D2H5 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Trim42Q9D2H5 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.3
Trim42Q9D2H5 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Trim42Q9D2H5 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim42Q9D2H5 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim42Q9D2H5 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim42Q9D2H5 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim42Q9D2H5 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trim42Q9D2H5 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trim42Q9D2H5 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim42Q9D2H5 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.89■□□□□ 0.29
Trim42Q9D2H5 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim42Q9D2H5 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim42Q9D2H5 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim42Q9D2H5 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Trim42Q9D2H5 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim42Q9D2H5 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Trim42Q9D2H5 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim42Q9D2H5 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim42Q9D2H5 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim42Q9D2H5 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim42Q9D2H5 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim42Q9D2H5 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.88■□□□□ 0.29
Trim42Q9D2H5 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim42Q9D2H5 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Trim42Q9D2H5 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim42Q9D2H5 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Trim42Q9D2H5 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.88■□□□□ 0.29
Trim42Q9D2H5 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim42Q9D2H5 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim42Q9D2H5 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
Trim42Q9D2H5 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim42Q9D2H5 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim42Q9D2H5 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim42Q9D2H5 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim42Q9D2H5 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms