Protein–RNA interactions for Protein: Q9CZ83

Mrpl55, 39S ribosomal protein L55, mitochondrial, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl55Q9CZ83 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Mrpl55Q9CZ83 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Mrpl55Q9CZ83 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Mrpl55Q9CZ83 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Mrpl55Q9CZ83 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Mrpl55Q9CZ83 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
Mrpl55Q9CZ83 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC11.17□□□□□ -0.62
Mrpl55Q9CZ83 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Mrpl55Q9CZ83 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Mrpl55Q9CZ83 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Mrpl55Q9CZ83 Gm27275-201ENSMUST00000184318 272 ntBASIC11.17□□□□□ -0.62
Mrpl55Q9CZ83 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Mrpl55Q9CZ83 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC11.17□□□□□ -0.62
Mrpl55Q9CZ83 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Mrpl55Q9CZ83 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Mrpl55Q9CZ83 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Mrpl55Q9CZ83 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Mrpl55Q9CZ83 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Mrpl55Q9CZ83 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Mrpl55Q9CZ83 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Mrpl55Q9CZ83 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Mrpl55Q9CZ83 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Mrpl55Q9CZ83 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
Mrpl55Q9CZ83 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Mrpl55Q9CZ83 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Mrpl55Q9CZ83 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Mrpl55Q9CZ83 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Mrpl55Q9CZ83 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Mrpl55Q9CZ83 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Mrpl55Q9CZ83 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC11.17□□□□□ -0.62
Mrpl55Q9CZ83 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Mrpl55Q9CZ83 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Mrpl55Q9CZ83 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Mrpl55Q9CZ83 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Mrpl55Q9CZ83 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Mrpl55Q9CZ83 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC11.16□□□□□ -0.62
Mrpl55Q9CZ83 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Mrpl55Q9CZ83 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Mrpl55Q9CZ83 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC11.16□□□□□ -0.62
Mrpl55Q9CZ83 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Mrpl55Q9CZ83 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC11.16□□□□□ -0.62
Mrpl55Q9CZ83 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC11.16□□□□□ -0.62
Mrpl55Q9CZ83 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Mrpl55Q9CZ83 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Mrpl55Q9CZ83 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Mrpl55Q9CZ83 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Mrpl55Q9CZ83 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Mrpl55Q9CZ83 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Mrpl55Q9CZ83 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
Mrpl55Q9CZ83 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Mrpl55Q9CZ83 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Mrpl55Q9CZ83 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Mrpl55Q9CZ83 Dmtn-207ENSMUST00000228001 2437 ntBASIC11.16□□□□□ -0.62
Mrpl55Q9CZ83 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Mrpl55Q9CZ83 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Mrpl55Q9CZ83 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Mrpl55Q9CZ83 Gm43672-201ENSMUST00000199072 1731 ntBASIC11.15□□□□□ -0.62
Mrpl55Q9CZ83 Gm21596-201ENSMUST00000178049 1316 ntBASIC11.15□□□□□ -0.62
Mrpl55Q9CZ83 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Mrpl55Q9CZ83 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Mrpl55Q9CZ83 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC11.15□□□□□ -0.62
Mrpl55Q9CZ83 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Mrpl55Q9CZ83 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Mrpl55Q9CZ83 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Mrpl55Q9CZ83 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Mrpl55Q9CZ83 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Mrpl55Q9CZ83 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC11.15□□□□□ -0.62
Mrpl55Q9CZ83 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Mrpl55Q9CZ83 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC11.15□□□□□ -0.62
Mrpl55Q9CZ83 Gm18666-201ENSMUST00000190039 958 ntBASIC11.15□□□□□ -0.62
Mrpl55Q9CZ83 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Mrpl55Q9CZ83 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Mrpl55Q9CZ83 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Mrpl55Q9CZ83 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Mrpl55Q9CZ83 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Mrpl55Q9CZ83 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Mrpl55Q9CZ83 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Mrpl55Q9CZ83 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
Mrpl55Q9CZ83 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC11.15□□□□□ -0.63
Mrpl55Q9CZ83 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Mrpl55Q9CZ83 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Mrpl55Q9CZ83 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Mrpl55Q9CZ83 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Mrpl55Q9CZ83 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Mrpl55Q9CZ83 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Mrpl55Q9CZ83 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Mrpl55Q9CZ83 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC11.14□□□□□ -0.63
Mrpl55Q9CZ83 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Mrpl55Q9CZ83 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Mrpl55Q9CZ83 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Mrpl55Q9CZ83 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Mrpl55Q9CZ83 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Mrpl55Q9CZ83 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Mrpl55Q9CZ83 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Mrpl55Q9CZ83 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC11.14□□□□□ -0.63
Mrpl55Q9CZ83 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Mrpl55Q9CZ83 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC11.14□□□□□ -0.63
Mrpl55Q9CZ83 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Mrpl55Q9CZ83 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC11.14□□□□□ -0.63
Mrpl55Q9CZ83 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms