Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim13Q9CYB0 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim13Q9CYB0 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim13Q9CYB0 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC15.67■□□□□ 0.1
Trim13Q9CYB0 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim13Q9CYB0 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim13Q9CYB0 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim13Q9CYB0 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim13Q9CYB0 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim13Q9CYB0 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim13Q9CYB0 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim13Q9CYB0 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim13Q9CYB0 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim13Q9CYB0 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim13Q9CYB0 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.67■□□□□ 0.1
Trim13Q9CYB0 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim13Q9CYB0 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trim13Q9CYB0 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim13Q9CYB0 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim13Q9CYB0 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim13Q9CYB0 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim13Q9CYB0 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim13Q9CYB0 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim13Q9CYB0 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC15.66■□□□□ 0.1
Trim13Q9CYB0 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC15.66■□□□□ 0.1
Trim13Q9CYB0 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC15.66■□□□□ 0.1
Trim13Q9CYB0 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim13Q9CYB0 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim13Q9CYB0 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
Trim13Q9CYB0 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
Trim13Q9CYB0 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim13Q9CYB0 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim13Q9CYB0 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Trim13Q9CYB0 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim13Q9CYB0 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim13Q9CYB0 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Trim13Q9CYB0 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim13Q9CYB0 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim13Q9CYB0 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim13Q9CYB0 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim13Q9CYB0 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim13Q9CYB0 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim13Q9CYB0 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trim13Q9CYB0 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC15.65■□□□□ 0.1
Trim13Q9CYB0 Gm13401-201ENSMUST00000117074 291 ntBASIC15.65■□□□□ 0.1
Trim13Q9CYB0 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trim13Q9CYB0 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Trim13Q9CYB0 Gm44549-201ENSMUST00000208351 577 ntBASIC15.65■□□□□ 0.1
Trim13Q9CYB0 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Trim13Q9CYB0 AC164629.5-201ENSMUST00000220387 632 ntBASIC15.65■□□□□ 0.1
Trim13Q9CYB0 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Trim13Q9CYB0 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim13Q9CYB0 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim13Q9CYB0 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim13Q9CYB0 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim13Q9CYB0 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trim13Q9CYB0 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim13Q9CYB0 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim13Q9CYB0 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim13Q9CYB0 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim13Q9CYB0 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim13Q9CYB0 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim13Q9CYB0 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.1
Trim13Q9CYB0 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.1
Trim13Q9CYB0 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.64■□□□□ 0.09
Trim13Q9CYB0 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trim13Q9CYB0 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Trim13Q9CYB0 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim13Q9CYB0 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Trim13Q9CYB0 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim13Q9CYB0 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trim13Q9CYB0 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim13Q9CYB0 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim13Q9CYB0 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Trim13Q9CYB0 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Trim13Q9CYB0 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim13Q9CYB0 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim13Q9CYB0 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim13Q9CYB0 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim13Q9CYB0 Flg-201ENSMUST00000050758 1488 ntBASIC15.64■□□□□ 0.09
Trim13Q9CYB0 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trim13Q9CYB0 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trim13Q9CYB0 Gm11620-201ENSMUST00000118770 1845 ntBASIC15.64■□□□□ 0.09
Trim13Q9CYB0 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trim13Q9CYB0 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim13Q9CYB0 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.63■□□□□ 0.09
Trim13Q9CYB0 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim13Q9CYB0 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Trim13Q9CYB0 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim13Q9CYB0 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim13Q9CYB0 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trim13Q9CYB0 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
Trim13Q9CYB0 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trim13Q9CYB0 Gm7290-201ENSMUST00000104990 617 ntBASIC15.63■□□□□ 0.09
Trim13Q9CYB0 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim13Q9CYB0 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Trim13Q9CYB0 Gm12918-201ENSMUST00000120234 636 ntBASIC15.63■□□□□ 0.09
Trim13Q9CYB0 Gm15710-201ENSMUST00000121821 636 ntBASIC15.63■□□□□ 0.09
Trim13Q9CYB0 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trim13Q9CYB0 Gm6211-202ENSMUST00000167849 925 ntBASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms