Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ssr1Q9CY50 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Ssr1Q9CY50 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
Ssr1Q9CY50 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ssr1Q9CY50 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ssr1Q9CY50 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ssr1Q9CY50 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ssr1Q9CY50 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ssr1Q9CY50 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ssr1Q9CY50 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ssr1Q9CY50 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Ssr1Q9CY50 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ssr1Q9CY50 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Ssr1Q9CY50 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ssr1Q9CY50 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Ssr1Q9CY50 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.34■□□□□ 0.53
Ssr1Q9CY50 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Ssr1Q9CY50 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Ssr1Q9CY50 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.34■□□□□ 0.53
Ssr1Q9CY50 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ssr1Q9CY50 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ssr1Q9CY50 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ssr1Q9CY50 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Ssr1Q9CY50 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ssr1Q9CY50 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ssr1Q9CY50 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ssr1Q9CY50 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ssr1Q9CY50 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
Ssr1Q9CY50 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ssr1Q9CY50 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ssr1Q9CY50 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ssr1Q9CY50 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ssr1Q9CY50 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.33■□□□□ 0.52
Ssr1Q9CY50 Gm42545-201ENSMUST00000202755 922 ntBASIC18.33■□□□□ 0.52
Ssr1Q9CY50 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ssr1Q9CY50 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ssr1Q9CY50 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ssr1Q9CY50 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ssr1Q9CY50 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.33■□□□□ 0.52
Ssr1Q9CY50 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ssr1Q9CY50 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ssr1Q9CY50 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
Ssr1Q9CY50 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ssr1Q9CY50 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ssr1Q9CY50 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.32■□□□□ 0.52
Ssr1Q9CY50 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.32■□□□□ 0.52
Ssr1Q9CY50 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ssr1Q9CY50 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ssr1Q9CY50 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ssr1Q9CY50 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.32■□□□□ 0.52
Ssr1Q9CY50 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ssr1Q9CY50 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ssr1Q9CY50 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ssr1Q9CY50 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.32■□□□□ 0.52
Ssr1Q9CY50 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC18.32■□□□□ 0.52
Ssr1Q9CY50 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Ssr1Q9CY50 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ssr1Q9CY50 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ssr1Q9CY50 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.32■□□□□ 0.52
Ssr1Q9CY50 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ssr1Q9CY50 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.31■□□□□ 0.52
Ssr1Q9CY50 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ssr1Q9CY50 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ssr1Q9CY50 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ssr1Q9CY50 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ssr1Q9CY50 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ssr1Q9CY50 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
Ssr1Q9CY50 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ssr1Q9CY50 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ssr1Q9CY50 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ssr1Q9CY50 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ssr1Q9CY50 Gm12441-201ENSMUST00000121806 588 ntBASIC18.31■□□□□ 0.52
Ssr1Q9CY50 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.31■□□□□ 0.52
Ssr1Q9CY50 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ssr1Q9CY50 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ssr1Q9CY50 Gm20049-201ENSMUST00000219950 730 ntBASIC18.31■□□□□ 0.52
Ssr1Q9CY50 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.31■□□□□ 0.52
Ssr1Q9CY50 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ssr1Q9CY50 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ssr1Q9CY50 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ssr1Q9CY50 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ssr1Q9CY50 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ssr1Q9CY50 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ssr1Q9CY50 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ssr1Q9CY50 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ssr1Q9CY50 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ssr1Q9CY50 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ssr1Q9CY50 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.31■□□□□ 0.52
Ssr1Q9CY50 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ssr1Q9CY50 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ssr1Q9CY50 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ssr1Q9CY50 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ssr1Q9CY50 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ssr1Q9CY50 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ssr1Q9CY50 Gm26917-202ENSMUST00000192833 3329 ntBASIC18.3■□□□□ 0.52
Ssr1Q9CY50 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ssr1Q9CY50 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ssr1Q9CY50 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ssr1Q9CY50 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Ssr1Q9CY50 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms