Protein–RNA interactions for Protein: Q9CWX4

Rpusd4, Mitochondrial RNA pseudouridine synthase Rpusd4, mousemouse

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpusd4Q9CWX4 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rpusd4Q9CWX4 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rpusd4Q9CWX4 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rpusd4Q9CWX4 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rpusd4Q9CWX4 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rpusd4Q9CWX4 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rpusd4Q9CWX4 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Rpusd4Q9CWX4 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC14.33□□□□□ -0.12
Rpusd4Q9CWX4 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC14.33□□□□□ -0.12
Rpusd4Q9CWX4 Gm18025-201ENSMUST00000221733 862 ntBASIC14.33□□□□□ -0.12
Rpusd4Q9CWX4 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rpusd4Q9CWX4 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rpusd4Q9CWX4 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rpusd4Q9CWX4 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Rpusd4Q9CWX4 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rpusd4Q9CWX4 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rpusd4Q9CWX4 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rpusd4Q9CWX4 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC14.33□□□□□ -0.12
Rpusd4Q9CWX4 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rpusd4Q9CWX4 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rpusd4Q9CWX4 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpusd4Q9CWX4 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC14.32□□□□□ -0.12
Rpusd4Q9CWX4 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Rpusd4Q9CWX4 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpusd4Q9CWX4 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpusd4Q9CWX4 Gm42918-201ENSMUST00000199249 1580 ntBASIC14.32□□□□□ -0.12
Rpusd4Q9CWX4 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC14.32□□□□□ -0.12
Rpusd4Q9CWX4 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC14.32□□□□□ -0.12
Rpusd4Q9CWX4 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC14.32□□□□□ -0.12
Rpusd4Q9CWX4 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpusd4Q9CWX4 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rpusd4Q9CWX4 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpusd4Q9CWX4 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Rpusd4Q9CWX4 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpusd4Q9CWX4 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpusd4Q9CWX4 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC14.32□□□□□ -0.12
Rpusd4Q9CWX4 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpusd4Q9CWX4 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Rpusd4Q9CWX4 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rpusd4Q9CWX4 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Rpusd4Q9CWX4 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpusd4Q9CWX4 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Rpusd4Q9CWX4 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC14.32□□□□□ -0.12
Rpusd4Q9CWX4 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpusd4Q9CWX4 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpusd4Q9CWX4 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpusd4Q9CWX4 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpusd4Q9CWX4 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Rpusd4Q9CWX4 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Rpusd4Q9CWX4 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpusd4Q9CWX4 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpusd4Q9CWX4 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rpusd4Q9CWX4 Gm29241-201ENSMUST00000189260 1096 ntBASIC14.31□□□□□ -0.12
Rpusd4Q9CWX4 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC14.31□□□□□ -0.12
Rpusd4Q9CWX4 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Rpusd4Q9CWX4 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpusd4Q9CWX4 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Rpusd4Q9CWX4 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Rpusd4Q9CWX4 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Rpusd4Q9CWX4 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpusd4Q9CWX4 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rpusd4Q9CWX4 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpusd4Q9CWX4 Gm20628-201ENSMUST00000177363 3215 ntBASIC14.3□□□□□ -0.12
Rpusd4Q9CWX4 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Rpusd4Q9CWX4 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Rpusd4Q9CWX4 Dancr-204ENSMUST00000132389 2347 ntBASIC14.3□□□□□ -0.12
Rpusd4Q9CWX4 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Rpusd4Q9CWX4 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rpusd4Q9CWX4 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpusd4Q9CWX4 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpusd4Q9CWX4 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpusd4Q9CWX4 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Rpusd4Q9CWX4 Gm11643-201ENSMUST00000119578 864 ntBASIC14.3□□□□□ -0.12
Rpusd4Q9CWX4 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpusd4Q9CWX4 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC14.3□□□□□ -0.12
Rpusd4Q9CWX4 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Rpusd4Q9CWX4 AC153881.1-201ENSMUST00000214448 284 ntBASIC14.3□□□□□ -0.12
Rpusd4Q9CWX4 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpusd4Q9CWX4 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpusd4Q9CWX4 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpusd4Q9CWX4 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Rpusd4Q9CWX4 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpusd4Q9CWX4 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpusd4Q9CWX4 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpusd4Q9CWX4 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpusd4Q9CWX4 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC14.3□□□□□ -0.12
Rpusd4Q9CWX4 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpusd4Q9CWX4 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpusd4Q9CWX4 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpusd4Q9CWX4 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpusd4Q9CWX4 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC14.3□□□□□ -0.12
Rpusd4Q9CWX4 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpusd4Q9CWX4 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rpusd4Q9CWX4 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Rpusd4Q9CWX4 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpusd4Q9CWX4 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpusd4Q9CWX4 Gm10654-201ENSMUST00000098653 1633 ntBASIC14.3□□□□□ -0.12
Rpusd4Q9CWX4 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpusd4Q9CWX4 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpusd4Q9CWX4 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms