Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rtn4Q99P72 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rtn4Q99P72 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rtn4Q99P72 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rtn4Q99P72 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rtn4Q99P72 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Rtn4Q99P72 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC21.5■■□□□ 1.03
Rtn4Q99P72 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rtn4Q99P72 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rtn4Q99P72 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Rtn4Q99P72 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC21.5■■□□□ 1.03
Rtn4Q99P72 Gm18101-201ENSMUST00000215769 548 ntBASIC21.5■■□□□ 1.03
Rtn4Q99P72 Gm18032-201ENSMUST00000222541 538 ntBASIC21.5■■□□□ 1.03
Rtn4Q99P72 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC21.5■■□□□ 1.03
Rtn4Q99P72 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rtn4Q99P72 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Rtn4Q99P72 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rtn4Q99P72 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC21.5■■□□□ 1.03
Rtn4Q99P72 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Rtn4Q99P72 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rtn4Q99P72 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rtn4Q99P72 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Rtn4Q99P72 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
Rtn4Q99P72 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Rtn4Q99P72 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Rtn4Q99P72 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rtn4Q99P72 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rtn4Q99P72 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rtn4Q99P72 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Rtn4Q99P72 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Rtn4Q99P72 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rtn4Q99P72 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC21.49■■□□□ 1.03
Rtn4Q99P72 AA414768-201ENSMUST00000121924 1257 ntBASIC21.49■■□□□ 1.03
Rtn4Q99P72 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC21.49■■□□□ 1.03
Rtn4Q99P72 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rtn4Q99P72 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Rtn4Q99P72 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rtn4Q99P72 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rtn4Q99P72 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Rtn4Q99P72 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC21.49■■□□□ 1.03
Rtn4Q99P72 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC21.49■■□□□ 1.03
Rtn4Q99P72 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rtn4Q99P72 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rtn4Q99P72 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rtn4Q99P72 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rtn4Q99P72 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rtn4Q99P72 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Rtn4Q99P72 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rtn4Q99P72 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Rtn4Q99P72 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC21.48■■□□□ 1.03
Rtn4Q99P72 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC21.48■■□□□ 1.03
Rtn4Q99P72 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rtn4Q99P72 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Rtn4Q99P72 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC21.48■■□□□ 1.03
Rtn4Q99P72 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Rtn4Q99P72 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC21.48■■□□□ 1.03
Rtn4Q99P72 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC21.48■■□□□ 1.03
Rtn4Q99P72 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rtn4Q99P72 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rtn4Q99P72 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rtn4Q99P72 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC21.48■■□□□ 1.03
Rtn4Q99P72 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rtn4Q99P72 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rtn4Q99P72 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rtn4Q99P72 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Rtn4Q99P72 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rtn4Q99P72 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rtn4Q99P72 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rtn4Q99P72 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rtn4Q99P72 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Rtn4Q99P72 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC21.47■■□□□ 1.03
Rtn4Q99P72 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Rtn4Q99P72 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Rtn4Q99P72 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rtn4Q99P72 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC21.47■■□□□ 1.03
Rtn4Q99P72 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rtn4Q99P72 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rtn4Q99P72 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rtn4Q99P72 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Rtn4Q99P72 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rtn4Q99P72 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rtn4Q99P72 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Rtn4Q99P72 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Rtn4Q99P72 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rtn4Q99P72 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC21.46■■□□□ 1.03
Rtn4Q99P72 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Rtn4Q99P72 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.03
Rtn4Q99P72 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rtn4Q99P72 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rtn4Q99P72 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC21.45■■□□□ 1.02
Rtn4Q99P72 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rtn4Q99P72 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Rtn4Q99P72 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Rtn4Q99P72 Gm10459-201ENSMUST00000202708 1155 ntBASIC21.45■■□□□ 1.02
Rtn4Q99P72 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Rtn4Q99P72 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rtn4Q99P72 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rtn4Q99P72 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rtn4Q99P72 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Rtn4Q99P72 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms