Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cstf1Q99LC2 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cstf1Q99LC2 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.86■□□□□ 0.29
Cstf1Q99LC2 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Cstf1Q99LC2 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Cstf1Q99LC2 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Cstf1Q99LC2 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.85■□□□□ 0.29
Cstf1Q99LC2 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cstf1Q99LC2 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cstf1Q99LC2 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cstf1Q99LC2 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.85■□□□□ 0.29
Cstf1Q99LC2 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cstf1Q99LC2 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cstf1Q99LC2 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Cstf1Q99LC2 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cstf1Q99LC2 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cstf1Q99LC2 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cstf1Q99LC2 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cstf1Q99LC2 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cstf1Q99LC2 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cstf1Q99LC2 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cstf1Q99LC2 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.84■□□□□ 0.29
Cstf1Q99LC2 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cstf1Q99LC2 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cstf1Q99LC2 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Cstf1Q99LC2 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cstf1Q99LC2 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Cstf1Q99LC2 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cstf1Q99LC2 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cstf1Q99LC2 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cstf1Q99LC2 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cstf1Q99LC2 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cstf1Q99LC2 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Cstf1Q99LC2 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.84■□□□□ 0.29
Cstf1Q99LC2 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cstf1Q99LC2 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cstf1Q99LC2 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.84■□□□□ 0.29
Cstf1Q99LC2 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cstf1Q99LC2 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC16.84■□□□□ 0.29
Cstf1Q99LC2 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cstf1Q99LC2 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cstf1Q99LC2 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Cstf1Q99LC2 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cstf1Q99LC2 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Cstf1Q99LC2 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cstf1Q99LC2 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cstf1Q99LC2 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Cstf1Q99LC2 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Cstf1Q99LC2 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
Cstf1Q99LC2 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cstf1Q99LC2 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cstf1Q99LC2 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.83■□□□□ 0.28
Cstf1Q99LC2 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Cstf1Q99LC2 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cstf1Q99LC2 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cstf1Q99LC2 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cstf1Q99LC2 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Cstf1Q99LC2 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cstf1Q99LC2 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cstf1Q99LC2 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.82■□□□□ 0.28
Cstf1Q99LC2 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cstf1Q99LC2 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cstf1Q99LC2 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cstf1Q99LC2 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cstf1Q99LC2 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cstf1Q99LC2 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cstf1Q99LC2 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cstf1Q99LC2 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cstf1Q99LC2 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cstf1Q99LC2 Gm12644-201ENSMUST00000119935 606 ntBASIC16.82■□□□□ 0.28
Cstf1Q99LC2 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.82■□□□□ 0.28
Cstf1Q99LC2 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.82■□□□□ 0.28
Cstf1Q99LC2 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.82■□□□□ 0.28
Cstf1Q99LC2 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.82■□□□□ 0.28
Cstf1Q99LC2 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.82■□□□□ 0.28
Cstf1Q99LC2 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.82■□□□□ 0.28
Cstf1Q99LC2 AC138767.1-201ENSMUST00000222661 415 ntBASIC16.82■□□□□ 0.28
Cstf1Q99LC2 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cstf1Q99LC2 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cstf1Q99LC2 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Cstf1Q99LC2 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cstf1Q99LC2 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cstf1Q99LC2 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cstf1Q99LC2 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cstf1Q99LC2 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cstf1Q99LC2 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cstf1Q99LC2 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.81■□□□□ 0.28
Cstf1Q99LC2 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
Cstf1Q99LC2 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cstf1Q99LC2 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cstf1Q99LC2 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cstf1Q99LC2 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.81■□□□□ 0.28
Cstf1Q99LC2 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Cstf1Q99LC2 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cstf1Q99LC2 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.81■□□□□ 0.28
Cstf1Q99LC2 Gm11336-201ENSMUST00000118168 334 ntBASIC16.81■□□□□ 0.28
Cstf1Q99LC2 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cstf1Q99LC2 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.81■□□□□ 0.28
Cstf1Q99LC2 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC16.81■□□□□ 0.28
Cstf1Q99LC2 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms