Protein–RNA interactions for Protein: Q91ZW3

Smarca5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, mousemouse

Known RBP Predictions only

Length 1,051 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca5Q91ZW3 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Smarca5Q91ZW3 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Smarca5Q91ZW3 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC20.75■□□□□ 0.91
Smarca5Q91ZW3 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC20.75■□□□□ 0.91
Smarca5Q91ZW3 Gm10461-201ENSMUST00000202073 4786 ntBASIC20.75■□□□□ 0.91
Smarca5Q91ZW3 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smarca5Q91ZW3 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smarca5Q91ZW3 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smarca5Q91ZW3 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smarca5Q91ZW3 Gm26596-201ENSMUST00000180464 2655 ntBASIC20.75■□□□□ 0.91
Smarca5Q91ZW3 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smarca5Q91ZW3 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smarca5Q91ZW3 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smarca5Q91ZW3 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smarca5Q91ZW3 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smarca5Q91ZW3 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smarca5Q91ZW3 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Smarca5Q91ZW3 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smarca5Q91ZW3 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC20.74■□□□□ 0.91
Smarca5Q91ZW3 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smarca5Q91ZW3 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smarca5Q91ZW3 Krtap5-1-202ENSMUST00000188274 742 ntBASIC20.74■□□□□ 0.91
Smarca5Q91ZW3 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
Smarca5Q91ZW3 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smarca5Q91ZW3 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smarca5Q91ZW3 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smarca5Q91ZW3 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smarca5Q91ZW3 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smarca5Q91ZW3 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Smarca5Q91ZW3 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smarca5Q91ZW3 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Smarca5Q91ZW3 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smarca5Q91ZW3 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smarca5Q91ZW3 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smarca5Q91ZW3 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smarca5Q91ZW3 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC20.73■□□□□ 0.91
Smarca5Q91ZW3 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Smarca5Q91ZW3 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smarca5Q91ZW3 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smarca5Q91ZW3 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smarca5Q91ZW3 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Smarca5Q91ZW3 AC154855.1-201ENSMUST00000227353 1458 ntBASIC20.73■□□□□ 0.91
Smarca5Q91ZW3 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smarca5Q91ZW3 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smarca5Q91ZW3 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smarca5Q91ZW3 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smarca5Q91ZW3 Gm36858-201ENSMUST00000194501 2391 ntBASIC20.72■□□□□ 0.91
Smarca5Q91ZW3 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Smarca5Q91ZW3 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Smarca5Q91ZW3 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Smarca5Q91ZW3 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smarca5Q91ZW3 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Smarca5Q91ZW3 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smarca5Q91ZW3 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smarca5Q91ZW3 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smarca5Q91ZW3 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Smarca5Q91ZW3 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smarca5Q91ZW3 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Smarca5Q91ZW3 Gm8668-201ENSMUST00000120559 1447 ntBASIC20.71■□□□□ 0.91
Smarca5Q91ZW3 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Smarca5Q91ZW3 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
Smarca5Q91ZW3 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smarca5Q91ZW3 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smarca5Q91ZW3 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
Smarca5Q91ZW3 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smarca5Q91ZW3 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smarca5Q91ZW3 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Smarca5Q91ZW3 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smarca5Q91ZW3 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC20.71■□□□□ 0.91
Smarca5Q91ZW3 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smarca5Q91ZW3 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC20.71■□□□□ 0.91
Smarca5Q91ZW3 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smarca5Q91ZW3 Gm45203-201ENSMUST00000206384 1831 ntBASIC20.71■□□□□ 0.91
Smarca5Q91ZW3 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smarca5Q91ZW3 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Smarca5Q91ZW3 Gm45774-201ENSMUST00000211992 2665 ntBASIC20.71■□□□□ 0.91
Smarca5Q91ZW3 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
Smarca5Q91ZW3 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Smarca5Q91ZW3 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smarca5Q91ZW3 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Smarca5Q91ZW3 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Smarca5Q91ZW3 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smarca5Q91ZW3 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Smarca5Q91ZW3 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smarca5Q91ZW3 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smarca5Q91ZW3 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smarca5Q91ZW3 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smarca5Q91ZW3 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smarca5Q91ZW3 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Smarca5Q91ZW3 Gm3272-201ENSMUST00000181181 1229 ntBASIC20.7■□□□□ 0.9
Smarca5Q91ZW3 Gm10566-201ENSMUST00000086739 996 ntBASIC20.7■□□□□ 0.9
Smarca5Q91ZW3 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smarca5Q91ZW3 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Smarca5Q91ZW3 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Smarca5Q91ZW3 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC20.7■□□□□ 0.9
Smarca5Q91ZW3 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smarca5Q91ZW3 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smarca5Q91ZW3 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smarca5Q91ZW3 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smarca5Q91ZW3 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms