Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Pcdhb22Q91XZ8 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb22Q91XZ8 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb22Q91XZ8 Gm3272-201ENSMUST00000181181 1229 ntBASIC19.73■□□□□ 0.75
Pcdhb22Q91XZ8 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC19.73■□□□□ 0.75
Pcdhb22Q91XZ8 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Pcdhb22Q91XZ8 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb22Q91XZ8 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb22Q91XZ8 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Pcdhb22Q91XZ8 Gm10566-201ENSMUST00000086739 996 ntBASIC19.73■□□□□ 0.75
Pcdhb22Q91XZ8 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb22Q91XZ8 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb22Q91XZ8 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb22Q91XZ8 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb22Q91XZ8 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb22Q91XZ8 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC19.73■□□□□ 0.75
Pcdhb22Q91XZ8 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb22Q91XZ8 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb22Q91XZ8 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb22Q91XZ8 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC19.72■□□□□ 0.75
Pcdhb22Q91XZ8 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb22Q91XZ8 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb22Q91XZ8 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Pcdhb22Q91XZ8 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
Pcdhb22Q91XZ8 Gm18032-201ENSMUST00000222541 538 ntBASIC19.72■□□□□ 0.75
Pcdhb22Q91XZ8 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb22Q91XZ8 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Pcdhb22Q91XZ8 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb22Q91XZ8 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Pcdhb22Q91XZ8 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb22Q91XZ8 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb22Q91XZ8 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb22Q91XZ8 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
Pcdhb22Q91XZ8 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb22Q91XZ8 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb22Q91XZ8 Gm6190-201ENSMUST00000220683 1374 ntBASIC19.71■□□□□ 0.75
Pcdhb22Q91XZ8 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb22Q91XZ8 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb22Q91XZ8 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Pcdhb22Q91XZ8 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb22Q91XZ8 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb22Q91XZ8 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb22Q91XZ8 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb22Q91XZ8 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb22Q91XZ8 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb22Q91XZ8 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC19.71■□□□□ 0.75
Pcdhb22Q91XZ8 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Pcdhb22Q91XZ8 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb22Q91XZ8 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Pcdhb22Q91XZ8 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb22Q91XZ8 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC19.7■□□□□ 0.74
Pcdhb22Q91XZ8 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb22Q91XZ8 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Pcdhb22Q91XZ8 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb22Q91XZ8 AC158538.1-201ENSMUST00000225870 294 ntBASIC19.7■□□□□ 0.74
Pcdhb22Q91XZ8 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb22Q91XZ8 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb22Q91XZ8 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Pcdhb22Q91XZ8 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC19.7■□□□□ 0.74
Pcdhb22Q91XZ8 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb22Q91XZ8 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb22Q91XZ8 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb22Q91XZ8 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb22Q91XZ8 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb22Q91XZ8 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC19.69■□□□□ 0.74
Pcdhb22Q91XZ8 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb22Q91XZ8 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb22Q91XZ8 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb22Q91XZ8 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb22Q91XZ8 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC19.69■□□□□ 0.74
Pcdhb22Q91XZ8 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb22Q91XZ8 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.69■□□□□ 0.74
Pcdhb22Q91XZ8 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb22Q91XZ8 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb22Q91XZ8 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb22Q91XZ8 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Pcdhb22Q91XZ8 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb22Q91XZ8 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb22Q91XZ8 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Pcdhb22Q91XZ8 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb22Q91XZ8 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb22Q91XZ8 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb22Q91XZ8 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb22Q91XZ8 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb22Q91XZ8 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb22Q91XZ8 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb22Q91XZ8 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb22Q91XZ8 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb22Q91XZ8 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb22Q91XZ8 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb22Q91XZ8 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC19.68■□□□□ 0.74
Pcdhb22Q91XZ8 Gm26039-201ENSMUST00000158152 144 ntBASIC19.68■□□□□ 0.74
Pcdhb22Q91XZ8 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb22Q91XZ8 Gm22697-201ENSMUST00000175194 63 ntBASIC19.68■□□□□ 0.74
Pcdhb22Q91XZ8 Gm18101-201ENSMUST00000215769 548 ntBASIC19.68■□□□□ 0.74
Pcdhb22Q91XZ8 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb22Q91XZ8 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb22Q91XZ8 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb22Q91XZ8 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb22Q91XZ8 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms