Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb8Q91XZ2 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb8Q91XZ2 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.51■□□□□ 0.23
Pcdhb8Q91XZ2 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb8Q91XZ2 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Pcdhb8Q91XZ2 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb8Q91XZ2 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb8Q91XZ2 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb8Q91XZ2 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb8Q91XZ2 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb8Q91XZ2 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb8Q91XZ2 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb8Q91XZ2 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb8Q91XZ2 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb8Q91XZ2 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb8Q91XZ2 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.5■□□□□ 0.23
Pcdhb8Q91XZ2 Gm715-201ENSMUST00000117865 831 ntBASIC16.5■□□□□ 0.23
Pcdhb8Q91XZ2 Gm7638-201ENSMUST00000121348 967 ntBASIC16.5■□□□□ 0.23
Pcdhb8Q91XZ2 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.5■□□□□ 0.23
Pcdhb8Q91XZ2 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.5■□□□□ 0.23
Pcdhb8Q91XZ2 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.5■□□□□ 0.23
Pcdhb8Q91XZ2 Timm23-208ENSMUST00000226683 750 ntBASIC16.5■□□□□ 0.23
Pcdhb8Q91XZ2 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb8Q91XZ2 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Pcdhb8Q91XZ2 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb8Q91XZ2 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb8Q91XZ2 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb8Q91XZ2 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.5■□□□□ 0.23
Pcdhb8Q91XZ2 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb8Q91XZ2 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Pcdhb8Q91XZ2 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb8Q91XZ2 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb8Q91XZ2 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Pcdhb8Q91XZ2 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb8Q91XZ2 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb8Q91XZ2 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb8Q91XZ2 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.49■□□□□ 0.23
Pcdhb8Q91XZ2 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.49■□□□□ 0.23
Pcdhb8Q91XZ2 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.49■□□□□ 0.23
Pcdhb8Q91XZ2 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb8Q91XZ2 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb8Q91XZ2 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb8Q91XZ2 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb8Q91XZ2 Gm10812-201ENSMUST00000099864 546 ntBASIC16.49■□□□□ 0.23
Pcdhb8Q91XZ2 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb8Q91XZ2 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb8Q91XZ2 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb8Q91XZ2 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Pcdhb8Q91XZ2 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Pcdhb8Q91XZ2 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.49■□□□□ 0.23
Pcdhb8Q91XZ2 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb8Q91XZ2 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb8Q91XZ2 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb8Q91XZ2 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb8Q91XZ2 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb8Q91XZ2 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb8Q91XZ2 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Pcdhb8Q91XZ2 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb8Q91XZ2 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb8Q91XZ2 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb8Q91XZ2 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Pcdhb8Q91XZ2 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb8Q91XZ2 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Pcdhb8Q91XZ2 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Pcdhb8Q91XZ2 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb8Q91XZ2 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.48■□□□□ 0.23
Pcdhb8Q91XZ2 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb8Q91XZ2 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb8Q91XZ2 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Pcdhb8Q91XZ2 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb8Q91XZ2 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb8Q91XZ2 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb8Q91XZ2 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb8Q91XZ2 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb8Q91XZ2 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb8Q91XZ2 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb8Q91XZ2 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Pcdhb8Q91XZ2 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.47■□□□□ 0.23
Pcdhb8Q91XZ2 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.47■□□□□ 0.23
Pcdhb8Q91XZ2 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.47■□□□□ 0.23
Pcdhb8Q91XZ2 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.47■□□□□ 0.23
Pcdhb8Q91XZ2 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.47■□□□□ 0.23
Pcdhb8Q91XZ2 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.47■□□□□ 0.23
Pcdhb8Q91XZ2 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.47■□□□□ 0.23
Pcdhb8Q91XZ2 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb8Q91XZ2 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb8Q91XZ2 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.47■□□□□ 0.23
Pcdhb8Q91XZ2 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb8Q91XZ2 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb8Q91XZ2 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb8Q91XZ2 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.46■□□□□ 0.23
Pcdhb8Q91XZ2 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb8Q91XZ2 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb8Q91XZ2 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb8Q91XZ2 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb8Q91XZ2 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Pcdhb8Q91XZ2 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb8Q91XZ2 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
Pcdhb8Q91XZ2 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.46■□□□□ 0.23
Pcdhb8Q91XZ2 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms