Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rpa1Q8VEE4 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rpa1Q8VEE4 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rpa1Q8VEE4 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rpa1Q8VEE4 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Rpa1Q8VEE4 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rpa1Q8VEE4 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rpa1Q8VEE4 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.06■□□□□ 0.32
Rpa1Q8VEE4 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.06■□□□□ 0.32
Rpa1Q8VEE4 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Rpa1Q8VEE4 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rpa1Q8VEE4 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rpa1Q8VEE4 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rpa1Q8VEE4 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rpa1Q8VEE4 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Rpa1Q8VEE4 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rpa1Q8VEE4 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rpa1Q8VEE4 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rpa1Q8VEE4 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rpa1Q8VEE4 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rpa1Q8VEE4 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rpa1Q8VEE4 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rpa1Q8VEE4 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rpa1Q8VEE4 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rpa1Q8VEE4 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rpa1Q8VEE4 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Rpa1Q8VEE4 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rpa1Q8VEE4 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Rpa1Q8VEE4 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.05■□□□□ 0.32
Rpa1Q8VEE4 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rpa1Q8VEE4 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rpa1Q8VEE4 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rpa1Q8VEE4 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rpa1Q8VEE4 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Rpa1Q8VEE4 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rpa1Q8VEE4 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.05■□□□□ 0.32
Rpa1Q8VEE4 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rpa1Q8VEE4 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rpa1Q8VEE4 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rpa1Q8VEE4 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rpa1Q8VEE4 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Rpa1Q8VEE4 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rpa1Q8VEE4 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rpa1Q8VEE4 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rpa1Q8VEE4 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rpa1Q8VEE4 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rpa1Q8VEE4 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Rpa1Q8VEE4 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rpa1Q8VEE4 AV356131-201ENSMUST00000206201 750 ntBASIC17.04■□□□□ 0.32
Rpa1Q8VEE4 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rpa1Q8VEE4 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rpa1Q8VEE4 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Rpa1Q8VEE4 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rpa1Q8VEE4 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rpa1Q8VEE4 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rpa1Q8VEE4 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rpa1Q8VEE4 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rpa1Q8VEE4 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rpa1Q8VEE4 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rpa1Q8VEE4 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rpa1Q8VEE4 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.04■□□□□ 0.32
Rpa1Q8VEE4 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rpa1Q8VEE4 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rpa1Q8VEE4 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rpa1Q8VEE4 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rpa1Q8VEE4 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Rpa1Q8VEE4 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rpa1Q8VEE4 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.03■□□□□ 0.32
Rpa1Q8VEE4 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rpa1Q8VEE4 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
Rpa1Q8VEE4 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rpa1Q8VEE4 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rpa1Q8VEE4 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rpa1Q8VEE4 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rpa1Q8VEE4 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Rpa1Q8VEE4 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rpa1Q8VEE4 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rpa1Q8VEE4 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rpa1Q8VEE4 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rpa1Q8VEE4 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rpa1Q8VEE4 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rpa1Q8VEE4 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.03■□□□□ 0.32
Rpa1Q8VEE4 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rpa1Q8VEE4 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rpa1Q8VEE4 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rpa1Q8VEE4 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.02■□□□□ 0.32
Rpa1Q8VEE4 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rpa1Q8VEE4 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Rpa1Q8VEE4 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rpa1Q8VEE4 Gm10849-201ENSMUST00000100397 618 ntBASIC17.02■□□□□ 0.32
Rpa1Q8VEE4 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
Rpa1Q8VEE4 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Rpa1Q8VEE4 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.02■□□□□ 0.32
Rpa1Q8VEE4 Gm7291-201ENSMUST00000199147 382 ntBASIC17.02■□□□□ 0.32
Rpa1Q8VEE4 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.02■□□□□ 0.32
Rpa1Q8VEE4 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rpa1Q8VEE4 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rpa1Q8VEE4 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rpa1Q8VEE4 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.31
Rpa1Q8VEE4 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms