Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ddx39aQ8VDW0 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ddx39aQ8VDW0 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ddx39aQ8VDW0 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ddx39aQ8VDW0 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Ddx39aQ8VDW0 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ddx39aQ8VDW0 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.78■□□□□ 0.6
Ddx39aQ8VDW0 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ddx39aQ8VDW0 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.78■□□□□ 0.6
Ddx39aQ8VDW0 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC18.78■□□□□ 0.6
Ddx39aQ8VDW0 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ddx39aQ8VDW0 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC18.78■□□□□ 0.6
Ddx39aQ8VDW0 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ddx39aQ8VDW0 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ddx39aQ8VDW0 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Ddx39aQ8VDW0 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Ddx39aQ8VDW0 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ddx39aQ8VDW0 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ddx39aQ8VDW0 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ddx39aQ8VDW0 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ddx39aQ8VDW0 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ddx39aQ8VDW0 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ddx39aQ8VDW0 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ddx39aQ8VDW0 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ddx39aQ8VDW0 Phf7-203ENSMUST00000226565 1971 ntBASIC18.77■□□□□ 0.6
Ddx39aQ8VDW0 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ddx39aQ8VDW0 Wnt10b-204ENSMUST00000226655 1807 ntBASIC18.77■□□□□ 0.6
Ddx39aQ8VDW0 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ddx39aQ8VDW0 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ddx39aQ8VDW0 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ddx39aQ8VDW0 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ddx39aQ8VDW0 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ddx39aQ8VDW0 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ddx39aQ8VDW0 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC18.77■□□□□ 0.6
Ddx39aQ8VDW0 Gm11336-201ENSMUST00000118168 334 ntBASIC18.77■□□□□ 0.6
Ddx39aQ8VDW0 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Ddx39aQ8VDW0 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ddx39aQ8VDW0 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
Ddx39aQ8VDW0 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.77■□□□□ 0.6
Ddx39aQ8VDW0 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ddx39aQ8VDW0 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ddx39aQ8VDW0 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ddx39aQ8VDW0 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ddx39aQ8VDW0 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Ddx39aQ8VDW0 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Ddx39aQ8VDW0 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Ddx39aQ8VDW0 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Ddx39aQ8VDW0 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Ddx39aQ8VDW0 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx39aQ8VDW0 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx39aQ8VDW0 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx39aQ8VDW0 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx39aQ8VDW0 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx39aQ8VDW0 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx39aQ8VDW0 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx39aQ8VDW0 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx39aQ8VDW0 Gm28033-201ENSMUST00000184224 96 ntBASIC18.76■□□□□ 0.59
Ddx39aQ8VDW0 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx39aQ8VDW0 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Ddx39aQ8VDW0 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx39aQ8VDW0 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx39aQ8VDW0 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx39aQ8VDW0 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.76■□□□□ 0.59
Ddx39aQ8VDW0 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx39aQ8VDW0 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx39aQ8VDW0 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx39aQ8VDW0 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Ddx39aQ8VDW0 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx39aQ8VDW0 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx39aQ8VDW0 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx39aQ8VDW0 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx39aQ8VDW0 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx39aQ8VDW0 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx39aQ8VDW0 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx39aQ8VDW0 Otx2os1-206ENSMUST00000228153 787 ntBASIC18.75■□□□□ 0.59
Ddx39aQ8VDW0 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Ddx39aQ8VDW0 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx39aQ8VDW0 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx39aQ8VDW0 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx39aQ8VDW0 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC18.75■□□□□ 0.59
Ddx39aQ8VDW0 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx39aQ8VDW0 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx39aQ8VDW0 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Ddx39aQ8VDW0 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC18.74■□□□□ 0.59
Ddx39aQ8VDW0 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx39aQ8VDW0 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC18.74■□□□□ 0.59
Ddx39aQ8VDW0 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC18.74■□□□□ 0.59
Ddx39aQ8VDW0 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx39aQ8VDW0 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx39aQ8VDW0 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.74■□□□□ 0.59
Ddx39aQ8VDW0 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Ddx39aQ8VDW0 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Ddx39aQ8VDW0 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx39aQ8VDW0 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx39aQ8VDW0 Gm13186-201ENSMUST00000118031 316 ntBASIC18.74■□□□□ 0.59
Ddx39aQ8VDW0 Gm14464-201ENSMUST00000119658 1254 ntBASIC18.74■□□□□ 0.59
Ddx39aQ8VDW0 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC18.74■□□□□ 0.59
Ddx39aQ8VDW0 Mir3081-201ENSMUST00000175305 84 ntBASIC18.74■□□□□ 0.59
Ddx39aQ8VDW0 Gm27742-201ENSMUST00000184667 60 ntBASIC18.74■□□□□ 0.59
Ddx39aQ8VDW0 Gm17971-201ENSMUST00000190239 806 ntBASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms