Protein–RNA interactions for Protein: Q8VDF2

Uhrf1, E3 ubiquitin-protein ligase UHRF1, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uhrf1Q8VDF2 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Uhrf1Q8VDF2 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Uhrf1Q8VDF2 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Uhrf1Q8VDF2 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Uhrf1Q8VDF2 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Uhrf1Q8VDF2 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC17.4■□□□□ 0.38
Uhrf1Q8VDF2 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.4■□□□□ 0.38
Uhrf1Q8VDF2 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Uhrf1Q8VDF2 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Uhrf1Q8VDF2 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.4■□□□□ 0.38
Uhrf1Q8VDF2 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Uhrf1Q8VDF2 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Uhrf1Q8VDF2 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Uhrf1Q8VDF2 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Uhrf1Q8VDF2 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Uhrf1Q8VDF2 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Uhrf1Q8VDF2 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Uhrf1Q8VDF2 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Uhrf1Q8VDF2 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Uhrf1Q8VDF2 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Uhrf1Q8VDF2 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.39■□□□□ 0.37
Uhrf1Q8VDF2 Gm6296-201ENSMUST00000222599 943 ntBASIC17.39■□□□□ 0.37
Uhrf1Q8VDF2 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
Uhrf1Q8VDF2 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.39■□□□□ 0.37
Uhrf1Q8VDF2 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Uhrf1Q8VDF2 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Uhrf1Q8VDF2 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Uhrf1Q8VDF2 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Uhrf1Q8VDF2 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Uhrf1Q8VDF2 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Uhrf1Q8VDF2 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Uhrf1Q8VDF2 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Uhrf1Q8VDF2 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Uhrf1Q8VDF2 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Uhrf1Q8VDF2 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Uhrf1Q8VDF2 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Uhrf1Q8VDF2 Gm7862-201ENSMUST00000121461 292 ntBASIC17.38■□□□□ 0.37
Uhrf1Q8VDF2 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Uhrf1Q8VDF2 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC17.38■□□□□ 0.37
Uhrf1Q8VDF2 Gm6376-201ENSMUST00000209407 580 ntBASIC17.38■□□□□ 0.37
Uhrf1Q8VDF2 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Uhrf1Q8VDF2 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Uhrf1Q8VDF2 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Uhrf1Q8VDF2 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Uhrf1Q8VDF2 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Uhrf1Q8VDF2 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.38■□□□□ 0.37
Uhrf1Q8VDF2 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Uhrf1Q8VDF2 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Uhrf1Q8VDF2 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Uhrf1Q8VDF2 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Uhrf1Q8VDF2 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Uhrf1Q8VDF2 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Uhrf1Q8VDF2 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Uhrf1Q8VDF2 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Uhrf1Q8VDF2 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.38■□□□□ 0.37
Uhrf1Q8VDF2 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Uhrf1Q8VDF2 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Uhrf1Q8VDF2 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Uhrf1Q8VDF2 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Uhrf1Q8VDF2 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Uhrf1Q8VDF2 Gm15165-201ENSMUST00000118140 502 ntBASIC17.37■□□□□ 0.37
Uhrf1Q8VDF2 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Uhrf1Q8VDF2 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC17.37■□□□□ 0.37
Uhrf1Q8VDF2 Gm27867-201ENSMUST00000184778 125 ntBASIC17.37■□□□□ 0.37
Uhrf1Q8VDF2 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC17.37■□□□□ 0.37
Uhrf1Q8VDF2 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Uhrf1Q8VDF2 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Uhrf1Q8VDF2 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC17.37■□□□□ 0.37
Uhrf1Q8VDF2 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Uhrf1Q8VDF2 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Uhrf1Q8VDF2 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Uhrf1Q8VDF2 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Uhrf1Q8VDF2 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Uhrf1Q8VDF2 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.36■□□□□ 0.37
Uhrf1Q8VDF2 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Uhrf1Q8VDF2 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Uhrf1Q8VDF2 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Uhrf1Q8VDF2 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Uhrf1Q8VDF2 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Uhrf1Q8VDF2 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Uhrf1Q8VDF2 Gm37935-201ENSMUST00000192012 982 ntBASIC17.36■□□□□ 0.37
Uhrf1Q8VDF2 Gm44454-201ENSMUST00000198541 138 ntBASIC17.36■□□□□ 0.37
Uhrf1Q8VDF2 AC132104.2-201ENSMUST00000215011 266 ntBASIC17.36■□□□□ 0.37
Uhrf1Q8VDF2 AC138767.1-201ENSMUST00000222661 415 ntBASIC17.36■□□□□ 0.37
Uhrf1Q8VDF2 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Uhrf1Q8VDF2 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Uhrf1Q8VDF2 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Uhrf1Q8VDF2 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Uhrf1Q8VDF2 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.36■□□□□ 0.37
Uhrf1Q8VDF2 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Uhrf1Q8VDF2 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Uhrf1Q8VDF2 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Uhrf1Q8VDF2 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Uhrf1Q8VDF2 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Uhrf1Q8VDF2 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Uhrf1Q8VDF2 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Uhrf1Q8VDF2 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Uhrf1Q8VDF2 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Uhrf1Q8VDF2 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Uhrf1Q8VDF2 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms